Vigna unguiculata (cowpea): 114188001
Help
Entry
114188001 CDS
T06017
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114188001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vun03021
]
114188001
Transcription machinery [BR:
vun03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
114188001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
114188001
NCBI-ProteinID:
XP_027932276
LinkDB
All DBs
Position
6:27901843..27908211
Genome browser
AA seq
537 aa
AA seq
DB search
MSTDLQLKSSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENRSKCVDCGVTITRLIREYN
VRANSTNDKNYFIGRFMSGLPDFSKKKSAENKWALQKEGLHGRQITDTLREKYKNKPWLL
EDETGQSQYQGHLEGSQSATYYLLMKEKKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRKKTADGYQRWMMKAANNGPAAFGEHGKFEDKESNTGGGRSRKKTGEDDEGHVSDKGE
EDEDEESDRKSRLGLNKRAGDDDEEGPRGGDHDLDDDDVEKGDDWEHEEIFTDDDEAVGN
DPEEREELAPEVPAPPEIKQDEEEEDEDNEEGGGLSKSGKELKKLLGKASGLNESDAEDD
DDDDDDMDDEVGNPPVIATKQKDAPKEEPVDISPSKPAATGPARGTPSSKSSKGKRKSNE
EAKPANTATPKKVKQENEPKSTKEINGSASKSSAPTKGTPPSSKPGSSGTATGPVSEEEI
RAVLRQKTPVTTQDLVAKFKARLRSSEDKQAFAEILKRISKIQKTANGSSYVILRDK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggacctgcaattgaaatcgagttgcagcggatgcggatcaacgacggatctc
tacggaagcaattgcaagcacatgactctgtgcttgagctgcggcaaaaccatggccgag
aaccgctccaaatgcgtcgattgtggtgttaccattactcgcctgattcgagaatacaat
gttcgtgcaaattctaccaatgacaagaactactttattggaaggttcatgtccggttta
ccagatttttcgaagaagaaaagtgctgagaacaagtgggctctgcagaaggaaggactg
cacggtcgccaaattactgatactttgcgggagaagtacaagaacaagccttggctcttg
gaggacgaaacaggtcagtcccagtaccagggtcatctagaaggttcacaatcggctaca
tattacctgctaatgaaagaaaagaaggaatttgttgccattcctgctggttcttggtac
aactttaacaaggttgctcaatataagcaattgacattggaggaagcagaagagaagatg
aagaatagaaagaaaactgcagatggatatcagagatggatgatgaaagcagcaaataat
ggcccagctgcatttggtgaacatggaaaatttgaggacaaggaaagcaacacaggtgga
gggagaagccgtaaaaaaactggtgaggatgatgaaggtcatgtttctgataagggggag
gaggatgaagacgaggaatccgataggaagagtagacttggacttaataaaagagctggt
gatgatgatgaagaaggtccaaggggaggggaccatgatctagatgatgacgatgttgag
aagggtgatgactgggagcatgaagaaattttcactgatgatgatgaagctgttggaaat
gatcccgaggaaagggaggagttggctcctgaagttcctgctcctcctgaaatcaaacag
gatgaggaggaggaggatgaagataatgaagaagggggaggtctgagtaaatctgggaaa
gaactgaagaagctgcttgggaaagctagtggtctgaatgaatctgatgcagaggatgat
gacgacgacgatgacgatatggatgacgaggttggcaatcctcctgtgattgctacgaag
cagaaggatgcccctaaggaagaacctgttgacattagcccttcaaagccagcagcaaca
ggacctgctcgtggaacaccatcttcgaagtcttcaaagggaaagagaaaatcaaatgaa
gaagcaaaaccagctaatactgcaacaccaaagaaggtgaaacaggaaaatgaaccgaag
tctaccaaagaaataaatgggtctgcatctaaaagcagtgcacctaccaaaggtacacct
ccatcatcaaagcctgggtcttccggaacagctactggacctgtgagtgaggaagaaatt
agggctgttttaaggcagaagactccagtgaccactcaggatcttgtagctaaatttaag
gcaagattgagatcttcagaggataagcaagcatttgctgagatcctcaagagaatctcc
aaaatacagaagactgcaaatggatccagttatgttatcctgagagataagtga
DBGET
integrated database retrieval system
