Vigna unguiculata (cowpea): 114188078
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Entry
114188078 CDS
T06017
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
114188078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vun03400
]
114188078
DNA repair and recombination proteins [BR:
vun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
114188078
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
PDE4_UCR
Motif
Other DBs
NCBI-GeneID:
114188078
NCBI-ProteinID:
XP_027932389
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Position
6:complement(25197023..25200819)
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AA seq
641 aa
AA seq
DB search
MGTEEGGHGNGTKVIPLIEKATNSTAPEVDPRLLKAIKTVVRYSDSELRVATLTLMDLMK
RDHAQVRYLALLIIDELFMRSKLFRTLVVENMDQLLSLSVGFRRNVPLPAPPAVATVLRS
KAIEFLEKWNVSFGVHYRQLRLGYDYLKNTLRLQFPNIQANVERVQQERRERERRSKEIL
LSKYESLKENSSSIKAAILSTMDEIDECLDILHAKREECVSDDVLDSDEHGDFHSLELQQ
LRLEALKEGEKVYENSDNTVVFDTLRELYKLLVAKHLITIQEWISVLVRVEVADNRFRDS
ILKEFIDIRNRLKSVKSKCEEAGCLLVNSSKHDEEDFWEEDNVVSMKTSSSIPNNKNKHV
GALKMNNANLGLHSNGSNGSETDSLRHQVHEVESDPERSKLIAEAPVVRWSSYLDNWGSN
RVFMANQRGLELDSHWGRVDADAVIPADKIAELNVHAMPYEEKKTEIQPCLAPLKKGGLC
QRRDMKLCPFHGPIIPRDDNGTPLSQSSLEGVNVDLRTDLVEQLAKQAVKNIRERDQEGA
KKREIDKQSLKRAKLAKIREHNEAVLRDAALASTSRSATLGEDGELTNEDKQSLASMLRK
KVTSKDRIAEKLLSSRARVTSDRQHMSSEDAKYREAFPNQW
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggggacggaggaaggagggcacggaaacggaacgaaggtgatacctttgattgagaag
gccaccaactccaccgcgccggaggtcgatccccgtctcctcaaggccattaaaactgtg
gttcgatattccgattcggagctccgcgtcgctacccttaccctcatggatctcatgaag
cgcgaccatgctcaggtccggtaccttgcgcttctaataatcgatgaactattcatgcgt
tcaaagctttttaggacccttgttgttgagaacatggatcagttgctgagtttgagtgtt
ggattcaggcgaaacgtgcctcttcctgctccacctgctgttgcgactgttttacgttcg
aaagccattgaatttttggagaagtggaatgtgtcgtttggggttcattacagacagctt
agattgggttatgattatctgaagaatacacttagactccaatttcctaacatacaagct
aacgtggagcgggttcaacaggagagaagggaaagggagaggaggtcaaaggagatttta
ctgagcaagtatgaatctttgaaagagaattcatcttcaataaaggcagcgattttatct
acgatggatgagattgatgagtgtttggacattttgcatgcgaaacgagaggagtgtgtg
tcagatgatgtattggacagcgacgaacacggtgactttcattctttggagctgcagcag
cttcgtcttgaagcattaaaagaaggggagaaggtttatgagaacagtgataatacagtg
gtttttgatacattgagggaactatacaaacttctggtggcaaagcacttgattacaatc
caagagtggatttctgttttagtaagagttgaagtagccgacaatagattcagagattcc
attttgaaagagttcattgatatccgaaatcgtctaaaatcggttaaaagtaaatgtgaa
gaggctggttgtttgctcgtaaactcatcaaaacatgatgaggaagatttttgggaggag
gataacgttgtttctatgaaaacctcatctagcatacccaataataaaaataaacatgtt
ggtgctcttaaaatgaataatgctaatcttggtttgcacagtaacgggtctaatggctct
gaaacggatagcctgcgtcatcaggtacatgaagttgagtcagaccctgagaggagtaaa
cttatagctgaagctcctgtggtacgatggagttcttacttggataattggggttcaaac
agggtttttatggctaaccagcggggtttggagcttgatagtcactggggtagggtggat
gctgatgcagttattccagcagataaaattgccgaattgaatgttcacgcaatgccttat
gaagagaagaaaactgaaatccaaccatgcctggctcctttgaagaaaggaggattgtgc
cagagaagagatatgaaactttgtccatttcatggacctatcattcctcgagatgacaac
gggacgccactcagtcagagctctttagaaggcgtgaatgtggatttaaggactgatcta
gtagagcagttagccaaacaagcagtgaaaaatattcgtgagagagatcaagagggggca
aagaagagagaaattgataaacagtcgcttaaacgtgcaaaactagcaaaaattcgggaa
cacaatgaagctgttttacgggatgctgctttggcttctacttcaagatcagccacgctt
ggagaagatggggagttaactaatgaagataaacaaagtcttgcgtccatgctgcgaaag
aaagtaacatcaaaagatagaatagctgagaaacttttaagttcgcgtgcaagggttact
tcagataggcagcatatgtcaagtgaggatgccaaatatagagaagcgttcccaaatcaa
tggtaa
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