Vigna unguiculata (cowpea): 114188274
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Entry
114188274 CDS
T06017
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114188274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114188274
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114188274
mRNA degradation factors
5'-3' decay
Decapping complex
114188274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EDC4_C
Ge1_WD40
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_EML_2
GerPC
HTH_47
Motif
Other DBs
NCBI-GeneID:
114188274
NCBI-ProteinID:
XP_027932668
LinkDB
All DBs
Position
6:complement(27235869..27247406)
Genome browser
AA seq
1421 aa
AA seq
DB search
MASSGNLNQQQQQQPQQQQPQTTHFDFNKLFKTPPAAAASASAAAPPTIPNPSNLNSSPS
FPSPSPSTPPPSSYPTPSSSYPPPTGTYPYHHPHFLPYPALHHQQQHQEHPLILHHLPQM
HAPQRPTIFPPPSPSPSSPHLPSSPNPTTGARLMALLGTQNPPSNQEPSVVYSSPSATSS
SPMVSEFSVPPNPSGLPSTQHSGSPVNLASPQSTPTRMLSSKLPKGRHLIGEHAVYDIDV
RMPGEVQPQLEVTPITKYASDPGLVLGRQIAVNKSYICYGLKLGAIRVLNINTALRYLLR
GHTQRVTDMAFFAEDLHLLASASTDGRIFVWKINEGPDEDDKPQITGKVILALQILGESE
SVHPRVCWHPHKQEILMVAIGNRILKIDSMKAGKGETFSAEEPLKCSIDKLIDGVHLVGK
HDGNVTELSMCQWMKSRLASASADGTVKIWEERKTTPLAVLRPHDGKPVNSVTFLTAPHR
PEHIVLITAGPLNQEVKIWVSDNEEGWLLPSDSESWHCIQTLDIRSSSESNPEDAFFNQV
VALPRAGLFLLANAKKNTIYAVHIEYGSNPTDTRMDYIAEFTVTMPILSLTGTSDNLPDG
EHIVQIYCVQTQAIQQYGLNLSQCLPPPLDNVELEKTESNLSRSFDAIDGSTNMETGNMP
QVHSSSSESVPVVSLAVNLPSSDISVLPPEASISSISEAETKANDVPSRNGFEHIQSAPP
PLPQSPRLSHKLSGFKSSSNNLETSSTTADHSSDQTNLDSSSERRMESEKDMADVPASGD
NLRKDDKVVSNDVSVVSNTQATYKHPTHLVTPSEIFSKTALSSENSHTSQGMNVPDVVAR
SDTENIEVDVVQVIGEMGSNQESTESQRDRDSHTNVTEKKEKLFYSQASDLGIQMARETY
YDMEAARQADHIKTIDAPGQSCNSVEEEVQDTSKDVPANISESETMATTVQSPAPAVKGK
RQKGKTSHLSGPSSASPSPFNSTDSSNDQGGNSGASSIEAALPQLSAMQEMMGQLLSMHK
EMQKQMNAMVSVPVTKEGKRLEGSLGRNMEKVVKAHTDALWARLQEENAKQEKLERDRTQ
QITNLISNYVNKDMVSILEKIIKKEISSIGTTITRSLSQVIEKTISSAITESFQKGVGDK
ALNQLEKSVGSKLEATVARQIQTQFQTSGKQALQEGLKTSLEASVVPAFEMSCKAMFEQI
DVAFQNGLVKHTAAIQQQFDSTYSPLAMTLRDTINSASSITQTLSGQLADGQRQLLEIAA
NSKVTVDPFVAQINNGLHEVTEDPTKELSRLISERKFEEAFTGALHRSDVSLVSWLCSQV
DLSGILAMVPLPLSQGVLLSLLQQLSCDISTDTPRKLAWMTDVAAAINPADPRIAAHVRR
ILDQVSHTLGHHRNLPTTSPSEASTIRLLMHVINSVLLSCK
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatctgggaatctaaatcaacagcagcagcagcaacctcaacaacaacaacct
caaacaacccattttgatttcaataagcttttcaagacaccaccagcagcagcagcatca
gcatcagcagcagcaccaccaactatccctaatccttcaaatttgaactcttctccttca
ttcccttctccttctccttccacaccccctccttcttcctaccctaccccttcttcctcc
taccctccgccgactggcacatacccttatcatcaccctcactttctcccctatccagcc
cttcaccaccaacaacagcaccaagaacaccctcttatccttcaccacctccctcaaatg
catgcccctcaaagacccactattttcccacccccttctccttctccctcctcaccacac
cttccttcatcccccaatcccaccaccggtgctcgcctcatggccttgctgggcacccaa
aaccctccctccaatcaggaaccatcggttgtatactcatctccttctgccacatcttca
tcacccatggtttctgagttttcagtgccaccaaacccttcagggttgccatccacacag
cactcaggctctcctgtgaatctggctagtcctcagtccactcctaccaggatgctcagc
agcaagctgcccaaggggcgccacttgattggagagcatgctgtgtatgacattgatgtt
aggatgcctggggaggtgcagcctcagcttgaagtcactccaatcaccaagtatgcttct
gatcctggccttgttcttggacgccaaatcgcagtgaataagtcttacatatgctatgga
ctcaaacttggggccatccgggtgcttaatatcaatactgcattgagatacttgcttcga
ggtcatactcagcgagtgacagacatggcattcttcgctgaggatcttcacctgttggcc
agtgctagcactgatgggagaatatttgtatggaaaatcaatgagggccctgatgaggat
gacaagcctcaaattactggaaaagttatcctagcacttcaaatattaggagagagtgag
tctgttcatccaagagtatgctggcatccccacaaacaagagattttaatggttgctatt
ggaaaccgtatcctcaaaatcgatagtatgaaagctggaaaaggtgaaactttttctgca
gaggagcctctcaaatgttccattgataagttgattgatggggtgcatcttgttggtaaa
catgatggcaacgtaactgagttgtcaatgtgccaatggatgaagagtcgattagcttca
gcttcagctgatggcacggtgaagatatgggaagaacgtaagacaacaccacttgctgtt
ttaagaccacatgacggtaaacctgtaaattctgtaacattcttgactgctcctcatcgt
cccgagcacattgttcttatcacagcggggccactaaatcaggaagtgaagatatgggtc
tctgataatgaggaaggctggctattgcctagtgattctgagtcatggcattgtattcag
actttagacattagaagttcgtctgaatccaaccctgaggatgcattctttaatcaagtt
gtagcattgccccgtgctggtttatttctgcttgcaaatgccaagaaaaatacaatatat
gctgtgcacatagagtacggatccaatccaactgatacccgcatggattacattgctgag
ttcacagtcacaatgcctatattaagtcttacaggaaccagtgataatttaccagatgga
gagcatattgtgcagatatattgtgtccaaacacaagctattcaacagtatggactcaat
ttgtcacaatgtttgcctccacccttggacaatgttgaacttgagaaaacagaatccaat
ttgtcacgttcttttgatgctattgatggatcgactaatatggaaactggaaatatgcca
caagttcattctagcagttctgaaagtgttcctgttgtgagcctggcagtaaatttgcct
tcatcagatatttcagttctaccacctgaagcttctatatcttccatatcagaagcagag
accaaggctaatgatgtaccttctcgtaatggttttgaacatattcaaagtgctccacct
ccacttcctcagagtccaagattgtcccacaagttatctggtttcaaaagttcatcaaat
aatttagagactagttctacaactgctgaccatagcagtgaccagacaaatcttgattct
tcatctgaacggagaatggagtctgaaaaagatatggcagatgtgcctgcatcaggtgac
aatttgagaaaggatgataaagttgtttcaaatgatgtttctgtggtttctaatacccaa
gcaacatataaacacccaacccatttggtaactccatctgagatattctctaaaactgct
ttatcttctgagaattcccatacttctcaaggtatgaatgttccagatgtggttgcccgt
agtgatacagaaaacattgaagtagatgttgttcaagttataggggagatgggttctaat
caagaaagtaccgagtctcaaagagacagagactctcacaccaatgttactgagaagaaa
gagaaattattttattctcaggcttctgatctaggcattcagatggctagagagacttat
tatgacatggaggcagctcgtcaagctgatcatattaagaccattgatgcacctggtcaa
agttgtaactctgttgaagaagaagttcaagacacaagtaaggatgtacctgcaaacatc
agtgaatcagaaaccatggctactactgtgcaatcacctgcacctgctgtgaaaggtaaa
agacaaaaagggaaaacttcacatctgtctggtccatcttctgcttctcctagtcctttt
aactcaacagattcatcgaatgatcaaggaggaaattcaggagcatcatccatagaagct
gccttaccacagttatctgctatgcaggagatgatgggccagttgttaagcatgcataaa
gaaatgcaaaagcagatgaatgcaatggtttctgttccagtcactaaggaaggcaaaaga
ttagaaggatccttgggtcgaaacatggagaaagttgtcaaggctcacactgatgctttg
tgggctcgattgcaggaagaaaatgcaaagcaagagaagctagagcgagaccggacacag
caaataacaaatttgatctccaattatgtaaacaaagatatggtatctatattggagaaa
atcattaagaaggaaatatcttcaattggaacaaccattactcgttcattaagtcaagtt
atagagaaaacaatatcttcagctattacagaatcattccagaagggggtgggagacaag
gcattgaatcaactagaaaaatcagttggttcaaaacttgaagctactgtggctaggcag
atacagacacaatttcaaacctctggaaagcaagctcttcaggagggacttaagactagt
ttggaagcttcagtcgttccagcatttgagatgtcttgcaaggctatgtttgagcaaatt
gatgttgcttttcaaaatggacttgtgaagcacacagctgctattcaacagcagtttgat
tctacttattctcctctagccatgacgttgagggatacaattaattcagcatcatcaatc
actcaaactttgagtggacaattggctgatggccaacgtcaactgttagaaattgcagct
aactccaaagtaacagtggatccctttgtagcacaaattaacaatggcttgcatgaggtg
actgaggatcctaccaaagaactatcaaggttgataagtgagagaaaatttgaggaagca
tttacaggggcccttcatagaagtgacgtttcattagtttcttggttatgttctcaggtt
gatttatctggcattttggctatggtgccattgccattaagccaaggagtacttctgtct
cttctacagcagttgtcctgtgatatcagtacagacacgcccagaaaattggcatggatg
acagatgtggcagctgctataaatccggcagatccaaggattgcagcacacgtgcggcga
atattagatcaagtgtcccacacacttggccatcatcggaatttacctactacctcccct
tctgaagcgagcacaatccgccttctcatgcatgtcataaactcggtgttgttgagctgt
aaatga
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integrated database retrieval system
