Vigna unguiculata (cowpea): 114188683
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Entry
114188683 CDS
T06017
Name
(RefSeq) protein SMG7
KO
K14409
protein SMG7
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114188683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114188683
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
114188683
mRNA cycle factors
Common to processing body (P body) and stress granule
114188683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
114188683
NCBI-ProteinID:
XP_027933076
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Position
6:complement(8144283..8150854)
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AA seq
974 aa
AA seq
DB search
MMLIEMDKMSAPSSRERAQRLYEKNLELENKRRRSAQARVPSDPNAWQQMRENYEAIILE
DHAFSEQHNIEYALWQLHYKRIEEFRAYFSAASLSSTNANSSQGVKGPARPDRITKIRLQ
FKTFLSEATGFYHDLITKIRAKYGLPLGYFEDSENRIVMEKDGKKSTEMKKGLVACHRCL
IYLGDLARYKGMYGEGDSKNREYTAASSYYLQAASLWPSSGNPHHQLALLASYSGDMLVT
IYRYFRSLAVDSPFTTARENLIVAFDKNRQSYSQLSGDAKAHAVKESSGRVTGKGRGKGE
AKLATRGAGVDASPKIGASSIQETYIYFCTRFVRLNGILFTRTSLETFAEVLAAVVTDLR
ELLSSGQDEELNFGTDAPENALGIVRIVCILVFTVYNVNKESEGQTYAEIVQRAVLLQNA
FAAAFELMGYIIERCTQLRDPSSSYLLPGILVFVEWLACYPDLAAGNDVDENQANLRSEF
WNRCVSFLNKLLSVGPMSIDDEEETCFNNMSRYEEGETENRHALWEDFELRGFVPLLPAH
TILDFSRKHSIGSDGDKERKARVKRILSAGKALANVVKVDKKMIYFDSKAKKFVIGVEPQ
TADDFVLPTYSEMRNATELVQEKPAVKSEMEIVQSNQHQQMEGDEDDEVIVFKPIVSETR
ADVVASSWAPNVGLEPALKASGGDLKFHVNSTPNPLMNLGHQTLSVPGSGMVPQHMQPVQ
LQTSRWLEEEISLANNFKGLGLFENGHAMKPGVQEAIGFSNHVSLPIPNQQSIGAADTSG
VFYGISKALDVVPSKVDAIASSGVLTDNLAVKASALPVGSRKAPVSRPTRHLGPPPGFSH
VPPKQGLESPVSDSISGNPMMDDYSWLDGYHFRSSTKGLGSNGPLNYSQSNSLLVNNNGF
SPNVSFPFPGKQVHSLPLHAEKQNGWQDYQNYDLLKSHHDQQLQPQQLTAGNQQFSPLPE
QFQGQSIWTGRYFV
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgatgttaatagaaatggataaaatgtctgctccttcatcaagggagcgtgcacaacgc
ctctatgaaaagaaccttgaattggagaataagcgtcggaggtcagctcaggcgcgggtt
ccatcagatcccaatgcttggcaacagatgcgggagaattatgaagcaataattctcgag
gatcatgctttctctgagcagcacaatattgaatatgcactctggcagttgcattataag
cggattgaggagtttagagcatacttcagtgctgcttctctttcttctacaaatgcaaac
tcatctcagggagtgaaaggccctgcacgaccggacaggataactaaaataaggctacaa
tttaagactttcctttcagaagcaactggattttaccatgaccttattacaaagatcagg
gctaagtatggtcttcctcttggttactttgaggattcagagaatcggattgtcatggag
aaagatggaaagaaatctactgagatgaagaaaggtttagtagcttgtcatcgttgtctg
atatacttgggtgatcttgctcgttataaaggaatgtatggtgaaggtgattcaaaaaat
cgggagtacacagcagcttctagttactacttgcaagctgcatctctttggccttctagt
gggaacccccatcaccagcttgctttgttggcttcatattctggggatatgctggtgacc
atatatcggtattttcgtagtctggctgtagatagtcccttcacaactgcaagagaaaac
ttgatagttgcatttgacaagaatcgtcaaagttactctcagctttctggtgatgctaaa
gctcatgcagttaaggaatcttctgggcgggtaacaggtaaaggaagaggaaaaggggaa
gcaaaacttgcaacaaggggtgctggtgttgatgccagtcctaaaataggcgcatccagt
atacaggaaacttatatatacttctgcactcgctttgtccgtctaaatgggatcttgttt
acacgcactagccttgagacttttgctgaagttcttgctgctgtagtcactgaccttcgt
gagcttctgtcttctgggcaagatgaagagctcaattttgggacagatgctcccgaaaat
gcacttggcattgtcagaattgtctgcattctagtatttacagtttataatgtgaacaag
gaatctgaaggtcaaacttatgcagaaattgtacagcgtgctgttctgcttcagaatgca
tttgctgctgcttttgaattgatgggttacataatagagagatgcacacagctgcgtgat
ccttcttctagttatcttttaccaggcattttggtttttgttgagtggttagcttgttat
ccagatcttgctgctggcaatgatgtggacgaaaatcaggcaaatttgagatcagagttt
tggaatcgatgtgtatccttcttgaataagctgctttccgttgggcctatgtctattgat
gatgaagaggagacttgctttaataacatgagcaggtatgaggaaggggaaactgaaaac
cgacatgctttgtgggaggactttgagctaaggggatttgttccacttcttcctgcacat
accatcttggatttttcaaggaagcattctattggaagtgatggtgacaaggaaagaaaa
gctcgagtcaaaaggattttatctgcagggaaggctttagctaatgttgttaaggttgat
aaaaaaatgatatattttgattcaaaggcaaagaaatttgtaattggtgttgagcctcaa
actgcagatgattttgttctacccacctactcagagatgcggaatgcaacagagttagtg
caagagaaacctgctgtcaaatcagagatggaaattgttcagtcaaaccagcaccagcaa
atggaaggagatgaggatgatgaggttattgtttttaagcctatagtgtctgagacacga
gctgatgtggttgcttcatcatgggcacccaatgtgggattggaacctgctctaaaagca
tctggaggggatttaaagtttcatgttaattctactcctaaccctctaatgaatcttggt
catcaaactttatctgttcctggtagtggtatggtgcctcaacacatgcaaccagttcag
ctgcagacatctaggtggttagaggaggaaatttctctcgctaacaattttaaaggtctt
gggttatttgagaatgggcatgctatgaaacctggtgtacaagaagctattggcttctcc
aaccatgtttcacttcctattcctaaccaacaatctataggtgctgctgataccagtggc
gtgttttatggtatctcaaaagccttggatgtagtaccatcaaaagttgatgctattgca
tcttctggagttcttactgataacttagctgtgaaagcgtcagctttgccagttggttct
agaaaagccccagtcagtcgaccaactaggcaccttggacctcctcccggtttcagtcac
gttcctcctaaacaaggccttgaatcccctgtttcagattcgattagtgggaatccaatg
atggatgattacagttggttggacggatatcattttcgttcatcaaccaaaggattagga
tccaatggtcctctcaactactctcagtcaaattctctgctagtcaataataatggcttc
agtcctaatgtcagctttccttttcctggcaaacaagttcattctctgcctcttcatgca
gagaaacaaaatggttggcaagattatcaaaactatgatcttttaaaatcacatcatgat
cagcagctgcagccacagcagctcacagcaggaaatcagcagttttctcctctgcctgag
caatttcaaggacagtcaatctggacaggtcgttactttgtgtga
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