Vigna unguiculata (cowpea): 114188693
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Entry
114188693 CDS
T06017
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vun03041
]
114188693
03009 Ribosome biogenesis [BR:
vun03009
]
114188693
Enzymes [BR:
vun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114188693
Spliceosome [BR:
vun03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114188693
Ribosome biogenesis [BR:
vun03009
]
Eukaryotic type
Pre-60S particles
Helicases
114188693
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ARTD15_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
114188693
NCBI-ProteinID:
XP_027933092
LinkDB
All DBs
Position
6:complement(17036295..17044447)
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AA seq
752 aa
AA seq
DB search
MSPSFVFEPPSDEEIEHSEREEEEEDEEEPEEAESGSDSDSEEEGLHKEARVSKKKTQSP
WDFAKYTESVAEEHARKSTTSVDEKISKALRQRSTPLVAELDHSSESELDEQEDYKPDEE
DEEEGYGNDSKSFFAPSDGTSFNADSFLQLNLSRPLLRACEALGYAKPTPIQAACIPLAL
SGRDICGSAITGSGKTAAFALPTLERLLFRPKRMRAIRVLILTPTRELAVQVHSMIEKLA
QFTDIRCCLVVGGLSTKVQEVALRTMPDIVVATPGRMIDHLRNAMSVDLDDLAVLILDEA
DRLLELGFSAEIQELVRLCPKKRQTMLFSATMTEEVDELIKLSLSKPLRLSADPSTKRPA
TLTEEVVRIRRMREVNQEAVLLAMCSKTFTAKVIIFSGTKQAAHRLKIIFGLAGLKAAEL
HGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGR
TARAGREGYAVTFVTDNDRSLLKAIAKRAGSKLRSRIVAEQSILKWSHIIEQMEDQIDEV
LREESEERALRKAEMEATKAENMIEHKEEIFSRPKRTWFVTEKEKKLAAKAAKASSLEKN
KSSGKEVMSAEQAEDLRMKEKRKREREKHLPRKKRRKLEAAREMLEDEEEDGNQVEAKGT
NKKEKGGLSLVDLAYRRAKAVKAVKKAVDSGKIVKKSQKKSSNVPRKTPSRTEEMRDLFQ
TDMKDKKPKRRGVGGGKKAKSSFKSKSRYKRK
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgtcccccagcttcgtcttcgaacctcccagcgacgaagaaatcgaacattccgaacga
gaagaggaagaagaagacgaagaagaaccagaagaagctgagtcaggatcagattctgac
tcagaagaagagggactgcacaaagaagcgcgggtttcgaagaagaaaacgcagtctcca
tgggacttcgccaaatacacggaatcagtggctgaggaacacgctcgcaagagcacaacc
tcggtggacgagaaaatctccaaagctctccggcaacgttccacgccgctcgttgctgag
cttgaccacagctccgagtctgaacttgatgaacaagaagattataaaccggatgaagaa
gacgaagaggagggttatggcaatgatagcaagtccttttttgctccttctgatggaacc
tctttcaacgctgattccttcctgcagcttaatttgtctcgtcctttgctccgggcttgt
gaggccctggggtatgctaaaccaacgccaattcaggcagcatgtattccattggcattg
tctggtcgtgatatatgtggtagtgccattactgggtcaggaaagacagctgcatttgca
ctacctacgctagagaggttgttgttccgtccaaaacgcatgcgtgcaataagggtcctc
attcttactccaaccagagaattggccgtccaagttcacagtatgatagagaagcttgct
cagtttactgatatacggtgttgcctggttgttgggggtctgtcaacaaaggtgcaagag
gttgctttgagaacaatgccagacattgttgtggctactccaggacgaatgattgaccat
ttacgcaatgctatgtctgttgatttggatgatcttgctgttctcatccttgatgaggca
gatcgtcttttggagcttgggtttagtgctgaaattcaagaacttgttcgcttgtgtccc
aaaaaaaggcagactatgctgttttcagcaacgatgactgaggaggttgatgaacttatt
aaactttccctgtcaaagcccttgcgtctttctgctgacccatctacgaaacggccagca
accttgactgaggaagttgttagaatacgaagaatgcgggaagtaaaccaggaagctgtt
cttcttgcaatgtgctcaaaaacttttactgccaaagtcatcatcttcagtggaacaaag
caagcagcacatagattaaagattatatttggattagctggcttaaaagctgctgagctt
catggaaatcttactcaagcccagcgtctggaagctttggaacagtttaggaagcagcaa
gtggattttttggttgcaacagatgtggctgcccgtggccttgacattatcggtgttcaa
acagttatcaactttgcatgtccacgtgatcttactagctatgttcatcgtgttggtcga
actgcaagagctggaagagaaggatatgctgtcacttttgtgactgacaatgatcgatca
cttttaaaagctattgccaagagggctggttcaaagttgagaagccgcattgttgctgag
caatctatacttaagtggtctcatattattgagcaaatggaggatcaaattgatgaagta
cttcgagaagagagtgaagaaagagctctaaggaaagctgaaatggaggccacaaaggcc
gaaaacatgattgaacataaggaagagatcttttcccgtcccaaaagaacatggtttgtc
acagagaaggagaaaaaacttgctgccaaagcagctaaggcatcctccctagagaagaac
aagagttctgggaaagaggtaatgagcgccgaacaagccgaagacctcagaatgaaagaa
aagaggaagcgagagcgagagaaacatttgcctagaaagaagcgcagaaagttagaagca
gctagagagatgttggaggatgaagaggaggatggtaaccaagtagaggccaagggaacc
aataaaaaagaaaagggtggattgtcacttgttgatcttgcttaccgaagggcgaaagca
gtgaaggctgttaagaaggcagtagattctggcaagattgtgaagaagagtcagaagaaa
tctagcaatgttcccagaaaaactccttcaaggacagaagagatgagggatctattccag
actgacatgaaggataaaaagccaaaaagaagaggtgttggaggaggaaagaaggcaaaa
agttcattcaaaagcaagtcaaggtacaagcgcaagtag
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