Vigna unguiculata (cowpea): 114188776
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Entry
114188776 CDS
T06017
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03013
Nucleocytoplasmic transport
vun03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114188776
03015 mRNA surveillance pathway
114188776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114188776
03041 Spliceosome [BR:
vun03041
]
114188776
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114188776
Spliceosome [BR:
vun03041
]
Complex C
Other components
EJC/TREX
114188776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
DUF4715
Motif
Other DBs
NCBI-GeneID:
114188776
NCBI-ProteinID:
XP_027933217
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All DBs
Position
6:complement(33662659..33666854)
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AA seq
427 aa
AA seq
DB search
MGNTAVEKTEEVLRNEIDELLRKQREITERLRDPRGLRRGALAGPALRTNGGVRQRPFIR
SGDRNDSEDQPPAKRRLSSAVVKVDDGELPEDADAGQDGKEKGSAVEGVNGTGAVVQSDR
NLFNSHQSGWSKRDGNQRTSKAVSDIPTAEHVPRVLPKNEDPSLVNRNKRMLGQLLGTLE
KFRKEDMQLSGTEAYMRRSNSLQRAEQRAREESERLRKEEREQIAENRRRDLTLRARVSA
KTEEKKLELLFLRWSEHHKRLSNFIRTKAEPPIYYLPNKPLDEDPTSLEKRKEEAFLEWK
NARREEVSEYQKQIREQYLGNVEKELERWQNARNARKANNDQNLQETMDKELDTHRLEHG
PKKRKIPGGNNNEDDDDDVEDINVGEDDMMDDELDDDSGRRIDETTKSEAGKAIADPAPD
ADNAEGK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggggaacacggcggtggaaaagacggaggaagtactccgcaacgagatcgatgagctt
cttcgcaaacagcgcgagattacggagaggcttcgagatcctcgtggcctccgcagaggt
gccttggcgggtcctgcccttcgaactaatggtggtgttcgccaaagacccttcattcgc
tctggagacaggaatgattctgaagatcaacctcctgcgaaacgacggctttcatccgct
gtggttaaggtggatgatggcgagttgcctgaagatgctgatgcgggacaggatggaaag
gagaagggttcagctgttgaaggtgtgaatgggaccggtgcagtggtccagagtgataga
aacctcttcaattctcaccaaagtggatggtctaagagagatggcaatcaaagaacttcc
aaggcggtttctgatattcccaccgcggaacatgttcctagggtactgccaaagaatgag
gatcccagtttggttaataggaataaaagaatgttgggtcagcttctgggaactctggag
aaattcagaaaggaagacatgcaactctcgggaacagaggcatacatgcgaagatccaat
tccttgcaaagagcggagcaaagggcacgtgaagaaagtgaaaggcttaggaaagaagag
cgtgagcagattgctgaaaatcgaaggagagacttgacccttagggctcgtgtgtctgct
aagacagaagaaaagaaattggagttgctgtttcttcgctggagtgagcatcataaaaga
ctaagcaattttataaggactaaagcagaacctccaatctactacttgcctaacaagccc
ttggatgaagatccaacgtcacttgagaagcgcaaagaagaggcattcctggaatggaag
aatgcaagaagagaggaagtgtctgagtaccagaaacagattagggagcagtaccttggc
aatgttgagaaggaattggagagatggcagaatgcaaggaacgcaaggaaagcaaacaat
gaccagaatttacaggagactatggacaaagagttggatactcataggctggagcatggt
cccaagaaaagaaagatcccaggtggaaacaataatgaagatgatgatgatgatgtggaa
gatataaatgtgggagaggatgacatgatggatgatgaattagacgatgactctggtagg
aggattgatgaaacaacaaagtcggaagcaggtaaggccattgcagatcctgcacctgat
gccgacaatgcggaagggaagtga
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