Vigna unguiculata (cowpea): 114189242
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Entry
114189242 CDS
T06017
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114189242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114189242
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
114189242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
114189242
NCBI-ProteinID:
XP_027933763
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Position
6:complement(18690040..18694292)
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AA seq
477 aa
AA seq
DB search
MESDLGKLFIGGISWDTDEERLKEYFGKYGEVIEAVIMRDRVTGRARGFGFVVFADPSVA
ERVIMDKHIIDGRTVEAKKAVPRDDQLNRQSGSAHASPGPGRTKKIFVGGLPSTITESDF
KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAV
PKELSPGPSRSPLIGYNYGLNRASNYLNSYAQGYSMSPIGGYGVRMDGRFSPLTGGRSGF
TPFGNTGYGMGVNLDSGLSPTFGGTSNYGSNLGYGRLLNPFYSGNSGRYTTPIGYSGVNG
RSDTVMNSPSRNLWGNGGLNNANNPVSPNPFLGSGSGAFGVSIGNSGTGWGPSIPAQGGG
AASGYGTGNNVYEGGDSSFGLGGAGYGRNSSSGVTPASAFNVSTGGYEGSYGDLYRTGSG
SVYNDSAWRSAVSEIDGSGSFGYGLGGIASDDPVKNSEGYIGNYNVTSRQPNRGIAA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggaatcggatcttggcaagctcttcattgggggaatatcttgggacactgatgaggaa
cggcttaaggaatattttgggaaatatggggaggtgatagaggctgtgatcatgagggat
cgcgtaacaggtcgtgctcgtggctttggttttgttgtctttgctgatccttctgttgca
gaaagagtaatcatggataaacacataattgatgggcgaacagttgaagcaaagaaagct
gttcctagggatgatcaacttaataggcagtctggcagtgcacatgcttctcctggtcct
ggacgcactaaaaaaatctttgttggaggtttaccatcaaccatcactgaaagtgatttt
aagaagtattttgatcagtttggtacaattacagatgttgtagttatgtatgatcataat
acccagaggccaagagggtttggcttcattacctatgattctgaggaagctgtggataga
gttctctataaaacttttcatgaactcaatggtaagatggttgaagtcaagagggcagtt
cccaaagagctttctccgggtcccagccgtagcccattgataggatataactatggtttg
aatagggccagtaactacttaaacagttatgctcagggttatagtatgagtccaatagga
ggatatggagtgaggatggatggtaggtttagtcctcttaccggtggtagaagtggattt
actccctttggcaatactggttatggaatgggagtgaatttggattcaggattgagccca
acctttggagggacttccaattatgggagcaatctaggatatggtcgactattgaatcct
ttctacagtggcaactctgggagatataccactcctataggctatagtggggttaatgga
agaagcgatactgttatgaactcaccatctcgtaatttatggggaaatgggggccttaat
aatgccaataatcctgtcagccccaaccctttcttaggatctggaagtggagcttttggt
gtttccattggaaatagtggcacaggctggggtccatccattccagcccagggtggaggt
gctgcttctggttatggtactgggaataatgtttatgaaggtggagatagcagctttggt
ctaggtggagcagggtatggaagaaacagcagttcaggtgtgactccagcctctgcattt
aatgtgtcaaccggtggttatgaaggatcatacggggacttgtaccgtactggcagtggt
tcggtttacaacgactctgcttggcgttctgctgtgtctgagattgatggttctggttca
tttggttatggtcttggtggtatagcttcagatgatccagtaaagaattctgagggttat
attggaaactacaatgttactagtagacaacctaatagaggaatcgctgcctag
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