Vigna unguiculata (cowpea): 114189934
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Entry
114189934 CDS
T06017
Name
(RefSeq) spliceosome-associated protein 130 A
KO
K12830
splicing factor 3B subunit 3
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114189934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vun03021
]
114189934
03041 Spliceosome [BR:
vun03041
]
114189934
03036 Chromosome and associated proteins [BR:
vun03036
]
114189934
Transcription machinery [BR:
vun03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
114189934
Spliceosome [BR:
vun03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
114189934
Complex B
114189934
Complex C
U2 SnRNP specific factors
114189934
Chromosome and associated proteins [BR:
vun03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
114189934
TFTC complex
114189934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
114189934
NCBI-ProteinID:
XP_027934463
LinkDB
All DBs
Position
7:40025459..40031276
Genome browser
AA seq
1214 aa
AA seq
DB search
MYLYSLTLQRPTGIICAINGNFSGGKSQEIVVARGKVLDLLRPDDNGRIQTILSVEIFGA
IRSLAQFRLMGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYL
AIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTLVYSICGVDCGFENPI
FAAIELDYSEADQDSTGQAASEAQKHLTFYELDLGLNHVSRKWSEQVDNGANLLVTVPGG
GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRDDLPAERGVLIVSAAMHKLKSMFFFLLQ
TEYGDIFKVTLEHNNDRVSELKIKYFDTIPVTASMCVLKSGFLFAASEFGNHALYQFKSI
GDEDDVEASSATLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPIMDMKVSNLFEEETPQ
IFTLCGRGPRSSLRILRTGLAVSEMAVSKLPGIPSAVWTVKKNVIDEFDAYIVVSFTNAT
LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKR
TISKVGSNRLQVVIALSGGELIYFEVDVTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR
FLAVGSYDKTIRILSLDPDDCMQALSVQSVSSAPESLLFLEVQASVGGEDGADHPASLFL
NAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFSIIVRGKRAMLCLSSRPWLGYIH
QGHFLLTPLSYETLEYAASFSSDQCVEGVVAVAGEALRIFTIERLGETFNETVIPLRYTP
RKFVLQPKRKLLVMIESDQGALTAEEREAARKECFEAAQAGENGTGSADQMENGGDDEDK
DDPLSDEHYGYPKAESDKWVSCIRVLDPRTGNTTCLLELQENEAAFSICTVNFHDKEYGT
LLAVGTAKGLQFLPKRTVTAGFIHIYRFVEEGRSLELLHKTQVEGVPLALCQFQGRLLAG
IGPVLRLYDLGKRRLLRKCENKLFPNTIVSIQAYRDRIYVGDVQESFHYCKYRRDENQLY
IFADDCVPRWLTASYHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGRIKWEQGKL
NGAPNKVEEIVQFHVGDVVTCLQKASLIPGGGECIVFGTVMGSVGALHAFTSRDDVDFFS
HLEMHMRQDHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPG
EILKKLEEVRNKII
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgtatctctacagtctcactctccagcgtcccactggcatcatctgtgccatcaacggc
aacttctccggcggcaagagccaggaaatcgtcgtcgcccgtggcaaggtcctcgatctc
ctccgtcccgacgacaatggccggatccaaaccatcctctccgtcgaaatcttcggcgcc
attcgctccctcgctcagttccgcctcatgggcgctcagaaggactacatcgtcgtcggc
tccgactccggtcgcatcgtaatcctcgaatataacaaagagaaaaacgtattcgacaaa
gtccaccaagaaaccttcggaaaatctggttgccgccgaattgtcccaggtcagtacctc
gccatcgatccaaagggtagggccgttatgattggcgcctgcgagaagcagaaactcgtt
tatgttttgaatagggacactgctgctaggttaaccatttcttcccctttagaagctcac
aaatctcacactttagtttattcaatttgcggtgttgattgtggttttgaaaaccctatt
tttgctgctattgaattggactactctgaggcagaccaggattccactggtcaggctgct
tctgaggctcagaagcatttgaccttttatgagcttgatcttgggctcaaccatgtttcg
cggaagtggtccgagcaggttgataatggggccaatttgcttgttactgttcctggtggt
ggtgatggccctagtggggtgcttgtatgtgctgaaaattttgttatttataagaatcaa
ggtcatccggatgttagggctgtgattccacggcgagacgacttgccagctgagcgtggc
gtgcttattgtctcggctgccatgcacaaactgaagagcatgttcttcttcctcctgcag
acggaatatggggacatttttaaggtcacgttggaacacaacaatgaccgtgtatctgaa
ttgaagattaaatactttgatactattcctgttactgcttcgatgtgtgtgctgaagtca
gggttcttgtttgctgcctcagagtttgggaaccatgctctgtatcaatttaagtctata
ggggatgaggatgacgtggaggcatcatctgccacgctaatggaaaccgaggaaggtttt
cagcctgtgtttttccagcccaggagactgaaaaaccttgtcaggattgaccaggttgag
agtttaatgccaataatggatatgaaggtcagtaatctctttgaagaggaaactcctcag
atttttactctctgtggacgtggtcctaggtcgtctttgaggattttgagaactggttta
gcggttagtgagatggctgtatccaagcttcctggtataccaagtgctgtctggacggtg
aagaagaatgttattgacgagtttgatgcttacattgttgtgtcattcacaaacgcaact
cttgtgctttccattggtgagactgttgaagaagttagcgacagtgggtttcttgacacg
actccctcccttgctgtttctttgataggagatgattctctcatgcaggttcacccaaat
ggtatcaggcatatcagggaggatggccgtattaatgaatggagaacacctggaaagagg
acaatttcaaaagttggatcaaatagacttcaggtggttattgcactcagtggaggggag
cttatatattttgaagtagatgtaactggccagttgatggaggtggagaagcatgaaatg
tctggagatgttgcttgtttagacattgctccagtgcccgaaggcagacaaagatctcga
tttcttgcagttggctcatatgacaagaccatccgcatcttatcactggatcctgatgat
tgtatgcaggcactaagtgttcagagtgtttcttcagctccagagtctctactttttctt
gaagttcaagcttctgttggtggtgaggatggtgcagatcatcctgctagcctattcttg
aacgctgggttacagaatggtgtgttgtttagaactgtggtggatatggttacaggtcag
ctttctgattcacgttccaggttcttaggattgagagccccaaagctgttttccatcatt
gtgagaggcaagcgggctatgctttgtttgtctagtcgaccctggcttggttatattcac
caaggacatttccttttaacacccctttcatatgaaacccttgaatatgctgcttcattt
tcatctgaccagtgtgtagaaggtgtagttgctgttgctggcgaagccttgagaattttt
accatagaaaggttaggggaaacatttaatgaaactgtaattccattaaggtacacacca
aggaaatttgttctgcaacccaaacgaaaactccttgtgatgattgagagtgatcagggt
gcattaactgcagaagagcgtgaagctgctaggaaagagtgttttgaggctgctcaagcc
ggggagaatggtactggaagcgcggaccaaatggagaatggtggtgatgatgaagataaa
gatgatcccctctctgatgagcactatggctatccaaaagctgaatcagacaaatgggtt
tcatgcatcagagttcttgatcccaggacaggaaatacaacttgtcttttggagcttcag
gagaatgaggctgctttcagcatatgcacagtaaatttccatgataaggaatatggaacc
cttttagctgttgggacggctaagggactgcaatttttgcccaaaaggactgtaactgca
ggatttattcatatttataggtttgtagaggagggaagatctcttgaacttcttcacaaa
acacaggtagaaggtgttcctcttgctctatgtcagtttcaaggaagattacttgcaggg
ataggacctgtgctcaggttatatgatttggggaaaagacgtctgttaagaaaatgtgag
aataagctattccccaacacgattgtctctattcaggcatatcgtgatcgaatttatgtt
ggtgatgttcaagagtctttccattactgcaagtataggcgggacgaaaaccaactttat
atatttgccgatgattgtgttccaaggtggcttactgcatcgtaccacatagattttgac
accatggcaggtgcagacaagtttggaaatatctattttgtgcggctgccacaggatgtt
tcagatgagatagaagaagatcctactggtggtaggatcaagtgggagcaaggaaagctg
aatggagctcccaataaggtggaagaaattgtacagtttcatgttggtgatgtggtcaca
tgcttgcaaaaggcttctctcataccaggtggtggagagtgcattgtatttggaacagtt
atgggaagtgttggcgcgctacatgcctttacttcacgagatgatgttgacttcttttct
catttggagatgcatatgagacaagatcacccacctttgtgcggaagagaccacatggca
tatagatctgcatattttcccgttaaggatgttattgatggggatctatgcgagcaattc
ccaacattgccaatggatttgcagagaaaaattgctgatgaattggacagaacccctgga
gagatactgaagaaactcgaggaagtgagaaataagattatttaa
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integrated database retrieval system
