Vigna unguiculata (cowpea): 114190253
Help
Entry
114190253 CDS
T06017
Name
(RefSeq) rRNA biogenesis protein RRP5 isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vun03009
]
114190253
Ribosome biogenesis [BR:
vun03009
]
Eukaryotic type
90S particles
Other 90S particles
114190253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
OB_RRP5
Spt6_S1
Suf
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
NRDE-2
UTP6_C
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
114190253
NCBI-ProteinID:
XP_027934864
LinkDB
All DBs
Position
7:1061490..1083584
Genome browser
AA seq
1914 aa
AA seq
DB search
MAPPHSNRTKKKVSGDKPKIDNVSKKILKRKERKQSSAAVAAIKSETLPLQLEDEVPDFP
RGGEVFLNPRNDYDEFGGGNHTRKTKKNKGKKPLRKYESVDDWGSLSGAGITGKLPRRVH
KITLKNITPGMKLWGVVAEVNEKDLVVSLPGGLRGLVHASDAVDPIFDDKIEVGEIFLSG
VFNVGQLVSCVVLKLDDDNKEKGRRKIWLSLRLSLVHKNYNLDAVQEGMVLAAYVKSIED
HGYILHFGVSSFTGFLPKDSSTEGFGGEVKIGNLLQGLVRSIDKVRKVVYLSSDPDTMSK
SVSKDLKGLSIDLLVPGMMINARVKSILENGVMLSFLTYFTGTVDLFHLQNIYPGPNWKE
KYIQSQKVVSRILFIDPSSRSVGLTLNPHLVQNRAPPSHVKIGDIYDNSKVVRVDKGSGL
LLEIPSIPEPTPAFVNMSDIAEGEIQKVEKKFKEGNHVRVRILGLRYLEGIATGVLKASA
LEEEVFTHSDVKPGMVVKAKILSVDSFGAIVQIPGGVKALCPLRHMSELEISKPRKKFKV
GAELVFRVLGCKSKRVTVTHKKTLVKSKLGIISSYTDATDGLITHGWITKIEVHGCFVRF
YNGVHGYAPRFELGLEPGADPGTVYNVGQVVKCRVVSSIPASRRINLSFIIKPTRVSEDD
VVTLGSLVSGVVDRITSTNVVVYVNASGFSRGTISTEHLADHHGQAILINELLKPGYNFD
QLLVLDIKGNNLILSAKSSLIKHAQQIPSDINQIQPNSVVNGYICNIIESGCFVRFLGHL
TGFAPRNKAADDQKANILEAYYIGQSVRSNISNVSSETGRITLSLKRTACSSIDASFIQD
YFLMDEKIAKLQNLGSGASDLRWVEGFNIGAVAKGRVKDVTDVGLVLSFEKYNDVFGFIT
NYQLAGTILESGSEVEALVLDVAKTERLVDLTLKPEFFNSSNESSISRTNKKKRRREASK
ELVLHQTVKAVVEIVKENYMVVSIPENDHVIGYASISDYNTQRFPHKQYQNGQSVIATVM
ALPSPETLGRLLLLLNEVNETASSKRSKKSSYKVGTLVEAEITDIKMLELKLKFGIGLHG
RIHITEVHNGNDLKNPFSSYKIGQTVTARIVAKPNETDGNRKGSQWELSVRPEMVTGSSD
IDDVSGNLEFIIGQCVSGYVSKVESEWVWLTISRNVRAQIYILDSATEPRELEDFQNRFH
VGQHVSGHVVSFNTEKKLLRLVLHPFSTLPCRTNEEPQINIMDKDLAAYVHEGKVLAGRV
SKILPGVGGLLVQISPRSFGKVHFTEIADTWVDDPLSGYHEGQFVKCVVLEITHIEKGIT
HVDLSLRSSSVKPSQDSADFESVVDGNGKWVEKIEDLHLDMIINGYIKNVTPKGCFIMLS
RKIDARILLSNLSDQYVKEPEKEFSVGKLVSGRVISVEPLSKRVEVSLRTSTGPKTSKSE
IVDFSKFHVGDIISGRIKRVESFGLFIAIDNTNMVGLCHVSEISDIEIENIEANYKTGER
VNARILKVDEERHRVSLGMKNSYMMDGTLLQIMSKEGSDELIEADGLKSITSMHSLLETS
NLAADDEVNQFPILSGSLDRGDVPPLDVSLDDFDQIDVNNANSQSKEHGNEEVIIHEKNK
RREKKKAKEEREKQIRAAEERLLEEDVPRTADEFEKLIRSSPNSSFIWINYMDFMISMAD
VEKARSIAERALMTINVREENEKLNIWKAYFNLENKYGNPSQEAVMKVFLRALQYNDPKK
VYLALLGMYERTEQHNLADELLNKMTKKFKHSCKVWLRRIQSLLKQNQDGIQPLIDRASL
SLPKHKHIKFFSQAAILEFKVGVPDRGRSLFEKILREYPKRTDLWSVYLDQEIHHKDEDI
IRALFERAVSLSLPPKKMKFLFKKYLDYEKSQGDDERIESVKRKAMEYVESTMS
NT seq
5745 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaccgcattccaatagaacgaagaagaaggtgtcaggagacaaaccgaaaatt
gataacgtctcaaagaaaatactcaaacggaaggagaggaagcaaagttctgccgccgtc
gccgccattaagtcggaaacactccctttgcagctagaagacgaggttcccgatttccct
cgaggtggagaagtttttttgaatccaaggaatgattatgatgagtttggtggcgggaat
cacacgagaaagacgaagaagaataagggaaaaaagccgttgaggaagtatgagtctgta
gatgattggggctcgctttctggtgcgggtatcaccggaaagttgccaaggcgcgtgcat
aaaattactctcaagaatataactcctggaatgaagctttggggagttgttgctgaagta
aatgaaaaggatcttgtagttagcttaccaggcggtttacgtggtttggtacacgcatca
gatgcagtggatcctatttttgatgacaagattgaggttggggaaattttcctttctggt
gtttttaatgttgggcagctggtttcttgtgttgtactgaaattggatgatgacaacaaa
gaaaaagggagaaggaaaatttggctttctttgcgtctttcattggtgcacaagaactac
aacttggatgctgttcaggaaggcatggtccttgctgcatatgtgaaaagcattgaagat
catggttacattcttcattttggtgtgtcttctttcacaggattcctaccaaaagacagc
tctactgaaggctttggtggtgaagtaaaaattgggaatcttcttcagggtttggttagg
agcattgataaagttcgtaaagttgtttacttgagttctgatcctgatacaatgtccaaa
agcgtgagcaaagatctcaaaggtttatcaattgatcttctagttccaggaatgatgata
aatgcccgtgtgaagtcaatccttgagaatggtgttatgttatcgtttctcacatacttc
actggaactgttgatctgtttcatttgcaaaatatttatcctggaccaaactggaaggag
aaatacattcaatctcagaaggttgtttctcgaatattattcattgatccatcaagtaga
tccgttggtttgacgctgaatccacatcttgttcagaacagagcccctccttctcatgtt
aaaattggagatatatatgacaactcaaaagttgttagggtggataaaggatcgggacta
ttgcttgaaattccatcaattccagagccaactccagcttttgtcaatatgtcagatatt
gcggaaggggagatccaaaaagtcgagaagaagttcaaggaaggaaatcatgttcgagtt
cggattcttgggttaagatatttggaaggaattgcaacaggagttttgaaggctagtgct
ttggaagaggaagtgtttactcattctgatgtcaagccaggcatggtggtaaaggctaag
attctttcagttgatagctttggtgctatcgtgcaaattccaggtggtgtgaaggctctt
tgtccgcttcgacatatgtctgaattggaaatttcaaagcctcgaaaaaaatttaaggtg
ggagctgaattggttttccgtgtgcttggttgcaagtcgaagagagtgacagttacacac
aagaaaacccttgttaaatcgaaacttgggattattagttcatatactgacgcaactgat
ggtttgataacccatggatggataacaaaaattgaagttcatggatgctttgtaaggttt
tacaatggggtgcatggatacgctcctagatttgaacttggattagagccaggtgctgat
ccaggtactgtgtacaatgttggacaagttgtcaaatgccgggttgtaagttccattcct
gcttcacggaggatcaaccttagtttcataataaaacccacaagggtgtctgaagatgat
gtggttaccttgggcagccttgtttcaggagttgttgacagaattacatccaccaatgta
gttgtttatgtcaatgcaagtggtttctcaaggggtacaatatccacagagcacttggca
gatcatcatgggcaagctattctgatcaacgaactattgaaacctggatataattttgat
caactgctggttctagatattaagggaaacaatttgattctgtctgccaaaagctctctt
attaagcatgctcagcagattccttcagatatcaatcagattcagcctaactctgttgtc
aatggctatatatgtaacataattgagtctgggtgctttgttcgtttccttggtcattta
actggctttgctcctagaaataaggctgcagatgaccagaaagccaatattttggaggcc
tattacattgggcaatcagttcggagcaacatatccaatgttagtagtgaaactggtaga
ataacgctatctctaaagcggacagcatgttcttcaattgatgcgtcatttattcaggac
tactttctcatggatgaaaagattgccaagttgcagaatttgggctctggtgcatctgat
ttgaggtgggttgaaggatttaacattggtgcggttgcaaaagggagagttaaggatgtt
acggatgttggacttgttctaagctttgaaaagtataatgacgtttttggttttattacc
aattatcagttggctggaactattttggagagtggctccgaagtggaagcattggttctt
gatgttgctaagacagaacggcttgttgatttaactctaaaaccagagttcttcaatagt
tctaatgaaagttccataagtcgtactaacaagaagaaacgtcgaagggaggcatccaag
gagttggtattgcatcagactgtgaaggcagttgtggaaattgtgaaagaaaattacatg
gttgtatcaattccagaaaatgatcatgtgataggatatgcatctatatcggactataac
acacaaaggtttcctcataaacaataccaaaatgggcagagtgttattgcaactgttatg
gcacttccgagtcctgaaacattgggaaggttgcttttacttctaaatgaggtcaatgag
accgccagttctaaaagatctaagaagtctagctataaagtgggaactctggttgaggca
gagattactgatataaaaatgcttgaactgaaattgaagtttggaattggtctacatggc
aggattcacataacagaggtacataatggtaatgatttgaaaaatccattctctagctac
aaaatcggtcagacagtgactgcaaggattgttgcaaaacctaatgaaacagatggcaac
aggaagggctcacagtgggagctttctgtcagacctgaaatggttacaggttccagtgat
atagatgatgtatctggaaatcttgagtttataattgggcaatgtgtgtctggttatgtg
agcaaagtagaaagtgaatgggtctggttaacaatatcgcgaaatgtaagggctcagata
tatattcttgatagtgctactgaacccagggagctagaggatttccaaaatcgattccat
gttgggcaacatgtttctggtcacgttgtaagtttcaacacagagaagaagctactgcgg
ttggttttacaccccttctcaactcttccttgccgaacaaatgaagagccacaaattaat
attatggacaaggatttagcagcatatgttcatgaaggaaaagttttggctggaagggtt
agtaaaatacttccaggtgttggtggattgcttgtccaaattagtcctcgttcatttgga
aaagtacactttactgaaattgcagacacatgggtggatgatccattgtctggatatcat
gaagggcagtttgtcaaatgtgtagtccttgaaattactcacatcgaaaagggtatcact
catgttgacttgtcattgcgatcttccagtgtgaagccttcccaggattctgcagatttt
gagagcgttgtggatggcaatggaaaatgggtagagaagattgaggatctacaccttgat
atgattataaatggttatattaagaatgtcacaccaaagggttgcttcattatgctctca
cgaaagattgatgccagaattcttctgtccaatttatctgatcaatatgttaaagaaccc
gagaaagaattttccgtgggaaaacttgtatctggcagggttatatctgtggagcctctt
tcaaaacgtgttgaagtttcactgaggacatcaacaggtcccaagacttccaaatcggag
attgttgatttcagtaaatttcacgtcggagatattatatctggcaggattaagcgggtt
gagtcatttggtttgttcatagcaattgacaacacaaacatggttggattatgccatgta
tcagaaatttctgatatcgagattgagaatatcgaagccaactataaaaccggagagaga
gtaaatgcaagaatattaaaggtggatgaggaaaggcacagagtttctttgggaatgaag
aattcatatatgatggatggaactttacttcaaataatgtccaaggaaggatcggatgaa
cttattgaagcagatggattgaagtctataacttctatgcatagtttgcttgaaacctca
aatttagctgccgacgatgaagtgaatcaattcccaattctttcaggatctctagatagg
ggagacgttccaccacttgacgtttctcttgatgattttgatcaaattgatgtaaataat
gctaatagtcaaagtaaagagcatggaaatgaagaagtcattatacacgaaaaaaataaa
aggcgcgaaaagaagaaagcaaaggaagaaagggagaagcaaataagggcagccgaggag
agattactggaggaggatgtacctagaaccgccgatgagtttgaaaagctgattagaagc
tctcccaatagcagtttcatctggataaattacatggatttcatgatttctatggctgat
gtggagaaagcccgctcaattgctgaaagagctctgatgaccataaatgttcgagaagag
aacgagaagcttaacatttggaaggcctactttaatttggaaaataagtatggcaaccct
agccaggaggccgttatgaaagtatttctaagagctctacaatacaatgatcccaaaaag
gtctatctagcactcttgggaatgtacgagaggaccgaacagcataatttagccgatgaa
cttctcaataaaatgacaaagaagttcaagcattcttgcaaagtttggttgaggcgtata
caaagtcttttgaagcaaaaccaagatggaatccaacctctcatcgatcgagcttcgtta
agccttcccaaacataagcatattaaatttttctctcaggcagctattcttgaattcaaa
gttggcgttccagatcgagggcgatccttgtttgaaaaaattcttcgggaatacccaaag
agaacagacctatggagtgtttatctcgatcaagaaattcatcataaagacgaagatata
attcgtgcgctgtttgaaagggctgttagtctgagtctcccacctaaaaagatgaagttc
ttgttcaaaaagtatcttgattatgagaaatcccaaggtgatgatgaacgtattgaatct
gtgaagaggaaagcaatggaatatgttgagagcactatgtcttga
DBGET
integrated database retrieval system
