Vigna unguiculata (cowpea): 114190372
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Entry
114190372 CDS
T06017
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4 isoform X1
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03018
RNA degradation
vun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114190372
09123 Folding, sorting and degradation
03018 RNA degradation
114190372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114190372
03041 Spliceosome [BR:
vun03041
]
114190372
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114190372
mRNA degradation factors
5'-3' decay
Lsm complex
114190372
Spliceosome [BR:
vun03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
114190372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
114190372
NCBI-ProteinID:
XP_027935021
LinkDB
All DBs
Position
7:21917008..21919316
Genome browser
AA seq
150 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGRGRDDGPGGRQGKGIGRGLEE
GGPKGQGGGRGRGGPGGKPGGNRGAGRGRG
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccctttcccttctcaagactgcccaaggccacccaatgttggtggaactgaaa
aatggggagacttataacggccatctggtaaattgtgatacatggatgaacatccatctc
agagaagtcatttgcacatctaaagatggagatagattttggcgtatgcctgagtgctac
attcgtggtaataccattaagtaccttcgggttcctgatgaggttattgacaaagtccag
gaagaaacaaagagtcgtgctgatcgcaaaccccctggtgtgggacgtggaaggggaaga
ggtagggatgatggtcctggaggacgtcaaggaaaaggaattgggcgtggccttgaagaa
ggtggaccaaaaggacaaggaggaggacgaggcaggggtggtccaggtggaaagccaggt
ggaaacagaggtgcagggcgaggtagaggttaa
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