Vigna unguiculata (cowpea): 114190649
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Entry
114190649 CDS
T06017
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vun03009
]
114190649
Ribosome biogenesis [BR:
vun03009
]
Eukaryotic type
90S particles
Other 90S particles
114190649
Pre-60S particles
Other pre-60S particles
114190649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
HEAT_GCN1
Arm
Motif
Other DBs
NCBI-GeneID:
114190649
NCBI-ProteinID:
XP_027935411
LinkDB
All DBs
Position
7:3189715..3202891
Genome browser
AA seq
1147 aa
AA seq
DB search
MEEEHTEPFKDGSDLCQQLMDRYANSAAPQHRHLLATAAALRSNIAAESLPLTPPAYFAA
AISALDAAEALDPVALSAVVSFMAIALPLVPPGGIAASKSHEASEILVAVLAREGEELGA
ACVRAMVKCLGVLIGFCDLEDWDGMKLGFEALLKFSICKRPKVRRCAQEAMEKVFKSIKS
STVTKEASKLVLSELKSCSALTLKLNALRTSDECTEDKVLKNEHLEVLHLMNLINLIAPY
LSTKIILKVLSEVHKLFSFMSPELARHALKTIEAIFEAVRIKNIVLETEDIVVSLTSFVS
LRDKNPLDTVILASKLLRVAMDLLYNGQISLWIKNLPPVCRSVIGLLTFEGNTASQASSI
LKDVLKHHISPISVLMGTDQTFHDGSLECVKADAIKSTCAVFEDALSSADGIPNEHVLSA
ISVLFLELGEFSLVLMRNIVLKLADLMVQISGGKVHNEHLQKCIGSAVYAMGIERFLSLV
PVSLDEHSYTYSNIWLVPILKRYVSGASLAYYMERIMPLAKSFKKASRKVGKSEISQEMM
ACAHDLLGLLPGFCRHATDTYQNFTRLSDVLVTFLKKDPSMHQNVSKTLQILVNENKAAL
SPKKSMEDCLGEYDFLSEFNMQPTYSKKTATKNIKSLASCSNQLLYVLSDLFISSLPEAR
LSLKGAIGCLASVTDSSVIKELLLSVLKRFQLVDCEGEAKVLSSPGEVDSDQSDLKGCSQ
RCLILEMVSCLVEGAKDNLIEIIYNLTIHSFQESDESVHQEAYNTMSKILEVWICENQCF
SSARYVELIDLLHGLKPPTAIASLRSRYSCFHLLMIHAMKANLEEEENSKVFLILNEIIL
TLKDGKDETRKEAYDLLLNISSTLRDSLYVGSIEPYHKLVSMIMGYLSGSSPHIKSGAVS
ALSVLVYQDTSLLISVSGLVPSLLSLLQTKDVEIIKAVLGFVKVMVSTLQARELQNILSD
VITEILPWSSVSRHHFRSKVTVIFEILLRKCGSAAVKLVTPEKYKFFLKNVLENRHGKSS
EAGTKDSENIPQDSSTKRPEWRKPVRAATSDKDSIKNNKRKRDNKFETAKPWHKEPFKST
SNDGLSLPKRSRPEESRKGKKSGNKSFIGGGGKRNVKMSSTEKNKAAPKVPTRPSKSHKL
KGKFQRN
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaacacacggagccattcaaggacggttcggacctctgccagcagctcatg
gaccgctacgccaactctgccgcgccgcagcaccgccacctccttgccaccgccgccgcc
ctgcgctccaacatcgctgctgagtctcttcccctcacgccgccagcatacttcgccgcc
gccatctccgccctcgatgccgcggaggcgctggaccctgtcgctctctccgccgtggtg
tcattcatggccatcgccctccccctggtgccgcctggcggcatcgcggcgtcgaagtcg
cacgaagcttcggagatcctcgtcgcggttctggcccgggagggtgaggagttgggcgct
gcgtgcgtgagggccatggtgaagtgcttgggggttttgattgggttttgtgatttggag
gattgggacggaatgaaattgggctttgaagcattgctcaagttctccatttgcaagcgc
cccaaggtacgcagatgtgctcaagaagctatggagaaggttttcaagtctatcaaatcc
tccacggttaccaaggaagctagcaagttggttttgtcagagctgaaaagttgcagtgct
ttgacactgaagttaaatgctttgaggacttctgatgaatgtacagaagataaggttttg
aaaaatgaacacctggaggtccttcatcttatgaatttaattaatctcattgctccgtat
ctatctacgaaaatcattctgaaagttctttcagaagtgcataaattatttagttttatg
tctccggaacttgcaaggcatgctcttaaaactattgaagctatttttgaagctgtgagg
ataaaaaatatagtgctagagacagaggacattgtagtttctcttacttcatttgtatct
ttgagggataagaaccctttggatactgtgattttggcatcaaaattattaagagttgca
atggacttactttataatggacaaataagcttgtggatcaagaatctccctccagtttgt
agatctgtgattggtcttctaacttttgagggaaacactgcatcacaagcttcaagtatt
ttgaaggatgtgctcaagcatcatattagtcccataagcgtgttaatgggtacagatcaa
acatttcatgatggtagtctggaatgtgttaaagcagatgcaataaaatcaacatgtgcg
gtttttgaggatgccctttcttctgctgatggaattccaaatgagcacgttttgtcagcc
atatctgttttatttcttgagcttggagaattctcgttggtgttgatgaggaacattgtg
cttaagcttgctgacttgatggttcaaatttccggaggcaaggttcacaatgagcatctt
cagaaatgcattgggtctgctgtttatgctatgggtatagagagatttctttcacttgtt
cctgtatcccttgatgaacacagctatacttattcaaatatttggctagtaccaatcttg
aagcgctatgttagtggtgcatcacttgcatactacatggagcgtatcatgcctcttgcc
aagtcctttaagaaggctagtcgaaaagtcggaaagtcagagattagtcaggaaatgatg
gcttgtgctcatgaccttttgggactgctgcctggcttttgtcgtcatgcaactgatact
taccaaaattttacccgtctctctgatgtccttgttacttttcttaagaaggatccttcc
atgcatcaaaatgtttccaagacattgcagattcttgtaaatgagaacaaagctgcactt
agccccaaaaagagtatggaagattgccttggtgaatatgattttttgtcagagttcaat
atgcaacctacttattcaaagaaaactgctaccaaaaacataaagtcattggcgtcttgt
tcaaatcagttgctgtatgttttatcagatttatttatcagttctcttcctgaagcacgc
ttatctttaaagggagcaattgggtgcctagcgtctgtcactgattcttctgtaatcaaa
gagcttcttctgtctgtgcttaagaggtttcaacttgtagattgtgaaggtgaagctaaa
gtattgtcaagtcccggagaggtagacagtgatcaaagtgacttgaagggatgctctcag
aggtgtctgatattggaaatggtatcttgcctcgttgaaggagcaaaggataatcttatt
gagataatttataatttaactatacattcatttcaggaaagtgatgaaagtgttcatcag
gaagcatacaacacaatgagcaaaattttggaagtctggatttgtgagaatcaatgcttc
tcttctgctcgatacgttgagctaattgatttattacatggattaaaacctccaactgca
attgcatctcttagaagtcgatattcttgttttcacctgctaatgatacatgcaatgaag
gctaatttagaagaagaggagaactcgaaggtttttcttattctcaatgaaattattctc
acattaaaggatggcaaggatgaaaccaggaaagaagcatatgatttgctcttaaatata
agttctaccctgagagactcattatatgttggttctattgaaccatatcacaaactagtt
agcatgataatgggatatctttctggatcatctccccatataaaaagtggagcagtgtct
gcactttctgtattggtataccaggatacaagtcttttaatatctgtttctggccttgtc
ccctctctcttatctctgctgcaaaccaaagatgtggaaatcataaaagctgtcttgggc
tttgttaaagtgatggtatctaccttacaagcaagggagctgcagaatattctgtcagat
gttattactgaaatccttccctggtcgtctgtctcaagacatcattttagatcaaaggtc
actgttatatttgaaatattattacggaagtgtggttctgccgctgtcaaactggttacc
ccggagaaatacaagttttttctcaagaatgttctagagaaccggcatggtaaatcaagt
gaagcaggcactaaagattcagaaaatatccctcaagattcttctacgaagaggccagag
tggaggaagcctgtaagagcagctacctcagataaagattcaataaagaacaacaaaaga
aagagagacaacaaatttgagacagccaagccttggcataaagaaccatttaaatctacc
agtaatgatggattaagtttacccaagagaagtaggccagaagaaagtagaaaaggcaag
aaaagtgggaacaaaagtttcattggtggtggtgggaagagaaacgtgaagatgtccagt
actgaaaaaaataaagcagctcctaaggtgcctacacgaccttctaagtcacacaagcta
aaaggaaaattccaaagaaattaa
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