Vigna unguiculata (cowpea): 114190951
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Entry
114190951 CDS
T06017
Name
(RefSeq) pre-mRNA-processing protein 40A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114190951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vun03041
]
114190951
Spliceosome [BR:
vun03041
]
Complex A
U1 snRNP components
U1 related factors
114190951
Complex B
114190951
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
SMODS
DUF2981
Motif
Other DBs
NCBI-GeneID:
114190951
NCBI-ProteinID:
XP_027935845
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All DBs
Position
7:36940623..36959776
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AA seq
1011 aa
AA seq
DB search
MSNNPQFPGLQPLRPPITGSVEPPRNYAPPMPVQFRPVVPAQQPQQFISMPSQHYQHHQH
QPVGPGGVPMIGVGMPPQNQQPQFSQPIQQLPPRPNPQLPPPSQAIPMPVARPNLHIPSE
SMMPQPDSQAPNGYTPGVGGPGMTLSSSYTFAASNYGQVQTNFNSTGQFQPIPQVHALTG
SSSQSITTGPTLQSNGGGQPLVTTVMPSATIVQPQLAKNGSTDWIEHTTATGRTFYYNKK
TKVSSWEKPFELMTPIERVDESTNWKEYISPDGRKYFYNKVTKESKWLIPEELKLAREQV
EKAIVSGPHSEALPNSHTQPSPAPSVAEATVNADNISVSSQGEPSSPVSVAPVVTTSTST
PQPEMPSGPSTSPSATPIAGSKVDELEAPVNIVTPSETSAGGDKAVDTDVSASITPTNDT
NNDSTQDILGSADGVPAEDKEDGKTESVGERSNHAAGETKAVEPETLVFANKMEAKDAFK
ALLDSANVGSDWTWDRAMRLIINDKRYGALKTLGERKQAFNEYLNQRKKHEAEEKRMKQK
KAREDFKKMLEESTDLTSSTRWSKAAPIFENDERFKAVERDRDRRDMFESFLEELVNKER
ARVQEERKRNIMEYKRFLESCDFIKASTQWRKVQDRLEADERCSCLEKIDRLEIFQDYLR
DLEKEEEEQKKIQKEELRKIERKNRDEFRKLMEEHIASGILTAKTHWRDYYTKVKDLHAY
IAVASNTSGSTPKDLYEDVAEELDKQYHEEKSRIKDAMKLAKITLFSTWTFEDFKSAVSK
DIGTSPISDFNLKLVFEELLERVKEKEEKEAKKRKRLADDFFHLLYSIKDITVSSNWEDS
IPLVEDSQEFRSIGDESLCKEVFEEYIAQLKEEAKESERIRKEERMKKEKDREERERRKG
KQRREKDGGRERGKDEAHKKDKADSDSMELSEIQSSKENKRKQRHSPEHEMDKEKTKKSH
GHGSDRKKSKRRASGHESDEGRHKRHKRDHRREGDHGDLEDGEFGDGVDRW
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataatccgcaatttccaggtttacagcctcttcggcctcctattactggttca
gtggaacctccccgcaattatgctccacctatgcctgttcagttccgacctgttgttcct
gctcagcagccacaacagttcatttccatgccttctcaacattaccagcatcaccaacat
caacctgttggtcctggtggtgttcccatgataggtgttggaatgcctcctcaaaatcaa
cagccccaattttctcaaccaattcaacagttacccccaagacctaatccgcagttacca
cccccatcgcaggcaattccaatgccggttgctcgcccaaacctgcacatcccatctgaa
tcaatgatgcctcaacctgattctcaagctccaaatggttacacaccaggtgtaggtggt
ccgggaatgacactctcttcatcatatacgtttgcagcatccaattatggtcaagtgcag
acaaattttaattctaccgggcaatttcaacctattcctcaagttcatgctctcacgggc
tcttcatcccagagcattaccacagggccaactcttcagagcaacggtggaggacagcct
ttagttacaactgtcatgccttcggctaccattgtccagccacagctggctaagaatggc
tccacagattggattgagcataccactgctactggaagaacattttattacaataagaaa
actaaagtatctagttgggagaagccttttgaattgatgacgcctattgagagagtggat
gaatcaacaaactggaaggagtatattagtcccgatggacgaaagtatttctacaacaag
gtcacaaaggaatctaagtggttaattcctgaggaactgaagttggctcgtgagcaagtt
gaaaaagcaattgtcagtggaccacattctgaagcattaccgaattctcatactcaaccc
tctccggcaccttctgtggctgaagcaacagtaaatgcagataatatatctgtaagcagt
caaggggaaccatcaagtcctgtttcagttgctccagttgttactacatccacaagtact
ccacaacctgagatgccttctgggccatctacgtctccttctgcaacccctatagctgga
tcaaaagtggatgaacttgaggcacctgtaaatattgtcacaccatcagaaaccagtgcg
ggaggtgataaagctgttgatacggatgttagcgcttctataacaccaacgaacgacact
aacaatgattcaactcaagatattctaggttctgccgatggagttcctgcagaagacaaa
gaagatggtaaaactgaatcagtaggggagagaagtaatcacgcggctggagaaacaaag
gcagttgagccagaaacccttgtttttgcaaataagatggaggccaaagatgctttcaaa
gcactcttggattctgcaaatgttggatctgactggacttgggatcgggctatgcgttta
ataattaatgataaaaggtatggtgcgttaaaaacacttggtgaaaggaagcaagctttc
aatgagtacttaaatcagaggaaaaaacatgaagctgaggaaaagcgaatgaaacaaaaa
aaagcacgggaggattttaaaaaaatgttagaagaatccacggatttgacttcatccact
agatggagcaaagccgcgcctatatttgaaaacgatgaacgattcaaggctgttgaacgt
gacagagatcgtagggatatgtttgaaagcttcttggaggaacttgtaaacaaggaacga
gcaagggtacaggaggaacgaaagcgaaatataatggaatacaaaaggtttttggaatcg
tgtgactttataaaggctagtacacagtggagaaaagttcaagatcgcttagaggctgat
gaaagatgttcttgtcttgaaaaaattgatcgcttggaaatattccaggattatttacgt
gatttagaaaaggaagaggaagagcagaagaagattcaaaaggaagaactgagaaagata
gaacgaaaaaaccgtgatgagttccgcaaattgatggaggaacatatcgcctcaggcatt
cttacagcaaaaactcactggcgtgattattatacaaaggtgaaagatttacatgcctac
atagcagtggcatcaaacacatcgggttcaactcccaaagacttgtatgaagatgttgct
gaagagctagataaacaatatcatgaagaaaaaagtcgaataaaagatgcaatgaaattg
gcaaagatcaccttattctcaacctggacgtttgaagacttcaaatcagctgtatcaaaa
gacattggtacttctccaatatctgatttcaatttaaagcttgtgtttgaagagctacta
gaacgggtgaaagagaaggaggagaaggaagctaagaagcgcaaacgtcttgccgatgat
ttctttcatctgctatattctatcaaggacattactgtgtcttcaaattgggaggactca
ataccacttgttgaagatagccaggagttcaggtctattggagatgaaagcctttgcaag
gaagtattcgaggagtacattgcacaactgaaagaagaggcaaaagaaagtgagcggata
cggaaggaggaaaggatgaagaaggaaaaagacagggaggaaagagagagaagaaaaggg
aagcaaagacgggagaaagatggagggcgtgaaagagggaaagatgaggcacacaagaag
gataaagcagacagtgacagtatggagttatctgaaatccaatcatctaaagaaaacaaa
aggaagcagcgtcatagtccagagcacgagatggataaagagaagactaagaaatctcac
ggtcatggtagtgaccgcaagaagtcaaagcgccgtgcatctggccatgaatcagatgaa
ggacgccacaaaagacacaagagagaccaccgcagagaaggtgatcatggagatcttgaa
gatggggaatttggagatggtgtggatagatggtag
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