Vigna unguiculata (cowpea): 114191037
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Entry
114191037 CDS
T06017
Name
(RefSeq) protein CHROMATIN REMODELING 8
KO
K10841
DNA excision repair protein ERCC-6
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
114191037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vun03036
]
114191037
03400 DNA repair and recombination proteins [BR:
vun03400
]
114191037
Chromosome and associated proteins [BR:
vun03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
114191037
DNA repair and recombination proteins [BR:
vun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
114191037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
TFIIF_beta
Motif
Other DBs
NCBI-GeneID:
114191037
NCBI-ProteinID:
XP_027935985
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All DBs
Position
7:15369360..15376297
Genome browser
AA seq
1217 aa
AA seq
DB search
MEEEEDRILLCSLGVKSANPEDIERDVLEKVTKNDSVTVTEAEGSAEEECSDLRENVDPS
ANPKAELHQKLRTVQFEIDAVASTVGRLRNVENNEECSNAGEEDLVSGIAEVDSSNNSNL
QCALSADRLRSLRKTKAQLEKELLNLSKDDASKSVEDGQLIFSLAREERKPKRKVKEDKK
SDKGKGKRLKKVSFDDDVDFDTVLDAASAGFVETERDELVRKGILTPFHKLKGFERRFEQ
LETSTSHNAAEEENASDLAAASVERAAKSMYEAARSRPTTKLLEPQDAPKLDAPTFPFRR
LRKPLQSSKPLDREMELNKDSKRKKRRPLPGRKWTKRVSCEDTRMEESENGDGCLDSSSF
ENLEEQGIELDDHESYVTLEGGLKIPVKIFEALFEYQKVGVQWLWELHCQRAGGIIGDEM
GLGKTVQVLSFLGALHYSGMYKPSIIVCPVTLLRQWKREANKWYPKFLVELLHESAEDSA
PRKKRAKSEETDCETNSSSDNDYEKGVPPSRNTRNWESLINRVMRSESGLLITTYEQLRI
LGDQLLDIQWGYAVLDEGHKIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFD
FVFPGKLGVLPVFEVEFAVPIAVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADV
NAQLPKKTEHVLFCSLTPEQVSAYRAFLASTDVEQILDGHRNSLYGIDVMRKICNHPDLL
ERDHAFSDPDYGNPERSGKMKVVGQVLNVWKEQGHRVLLFTQTQQMLDIFENFLTSSGHV
YRRMDGLTPVKQRMALIDEFNASSEIFIFILTTRVGGLGTNLTGADRVIIFDPDWNPSND
MQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKARDM
KDLFVLNVDGETGSTETSNIFSQISEQVNVIGTQKENKDKNEHSQTARLDSEDVVVNNDD
KSERGSPEGKGKEKVEHNNGVDDGTDILKSLFDANGIHSAVNHDLIMNAHDEEKMRLEEQ
ASQVAGRAAEALRQSRMLRSHDSVSVPTWTGRSGTAGAPSSVRRKFGSTVNPLLVNKSKG
TTKLNGFAAGASAGKALSSVELLAQIRGNQEKAIGAGLEHQSSMLSSSTNQARSLDVRSS
RATASSSGLQPEVLIRQICTFIQQRGGSSDSASIVQYFKERIPSQDLALFKNLLKEIATL
HKGSNGSHWVLKPDYQF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaggaggatcgaattttgctctgtagtttgggcgtaaaatctgccaatccc
gaagacattgaacgcgacgttttggaaaaggttactaagaatgattcagtgaccgttact
gaagctgaaggtagtgctgaggaagaatgttctgatttacgtgaaaatgtcgatccatcg
gctaatcctaaagctgaacttcatcagaagttgagaactgttcaatttgaaattgatgcc
gttgcctccaccgttgggcggttgagaaatgtggaaaataatgaagaatgtagtaatgct
ggtgaagaagacttggtgtcggggattgctgaggttgattcctccaacaattcaaacctt
cagtgtgctcttagtgccgataggttgaggagtctgaggaagacgaaagctcaactagag
aaagagcttttgaatttgtccaaggatgatgcttcgaaaagtgttgaggatggacaattg
atctttagtttagctagggaagaacggaagcccaagaggaaggttaaagaagataaaaaa
tcagacaaaggcaagggaaaacgacttaagaaagtttcgtttgacgatgatgttgatttt
gatactgttctggatgcagcctctgccggctttgttgaaacagaaagggatgaactggtg
aggaaaggaattttaaccccttttcataagttaaagggctttgagcgccgttttgaacaa
ctagaaacgtcaactagtcataatgcagctgaggaggaaaatgctagtgatcttgctgct
gccagtgttgaaagagctgccaaatctatgtatgaggcagcaagatctcgcccaaccacc
aagctgcttgagcctcaagatgcaccgaagcttgatgcacccacttttccatttcgaagg
ctcaggaaaccactacaatcttccaaacctctagatagagaaatggagctaaataaagat
tcaaaaaggaagaagaggcggcctctgcctggaagaaagtggaccaagcgtgtttcttgc
gaggatacacgtatggaagaaagtgaaaatggagatggttgcttagatagttccagtttt
gaaaatttagaagagcaaggcattgaacttgatgatcatgaatcttatgtaacgttagaa
ggtgggctgaaaatccctgttaagatatttgaagctctgtttgagtatcaaaaggttggt
gttcagtggctgtgggaattgcattgccaaagagctggtggaattattggtgatgagatg
gggcttggtaaaactgtccaggtcttatcgtttcttggtgcactgcactatagtggcatg
tataaacctagcattattgtctgccctgttacactcttgcgacagtggaaaagggaagct
aacaagtggtacccaaaattccttgtagagcttttacatgaatcggctgaagattctgct
cctaggaagaagcgagctaaatctgaagaaacagactgtgaaaccaatagttcaagtgac
aatgattatgaaaaaggtgtgccaccatctagaaacacaagaaattgggaatccctgata
aatcgtgtcatgagatcagaatctggattacttatcaccacttatgaacagctcagaata
ttgggggatcagttgcttgatattcaatggggttatgcagttcttgacgaagggcataaa
ataaggaatccaaatgctgaagttacccttgtttgcaagcagctacaaactgtacatcga
atcataatgactggtgcacctattcagaataaactgactgaactgtggtcattgtttgat
tttgtttttcctggaaaattgggtgttttacctgtattcgaagttgaatttgcagttcct
atagcagttggtgggtatgcaaatgcttcacctttgcaagtatccacagcatacaggtgt
gctgtggtgctccgtgatttaatcatgccttatcttctccgacggatgaaggctgatgtg
aatgcccaacttccgaagaagacggagcatgttctattttgcagccttacaccagaacaa
gtatctgcttacagagcatttttagctagcactgatgtggagcaaatattggatggacac
aggaattctctttatggaattgatgtgatgcgcaagatctgtaaccaccctgatctactt
gaaagggatcatgccttcagtgatccagattatggaaatccagaacgtagtgggaaaatg
aaagttgttggtcaagtgcttaatgtttggaaggaacagggtcaccgtgttctacttttt
actcaaacccaacaaatgcttgacatttttgagaattttttgacgtcttctggtcatgtt
tatcggagaatggatggtctcactcctgtaaaacagagaatggccttaatagatgaattt
aatgcctcaagtgaaatatttattttcattttaacgaccagagttgggggtttggggacc
aatcttacaggtgcagatagggtgatcatctttgaccctgactggaatccctcaaatgat
atgcaggccagagagcgggcttggcgtattggtcagaagcgggatgtaacagtgtatagg
ttgataacacggggaactattgaggagaaagtgtatcaccgtcagatttacaaacatttt
cttacaaataagatattgaagaatccacaacagaaaaggttctttaaggcccgggatatg
aaagatcttttcgtacttaacgtggatggagaaactgggtcaactgaaacttcaaacatt
tttagtcaaatatctgaacaagtgaatgtcattgggacacagaaagaaaataaggacaag
aatgaacatagccaaactgccagactggattctgaagatgttgtagttaataatgatgac
aagtcagagagaggatctccggagggaaaggggaaagagaaggttgaacataataatggg
gttgatgatggaacagatatattgaaaagcctttttgatgccaatgggatacatagtgcc
gtgaaccatgatttgatcatgaatgcccatgatgaggagaagatgagacttgaggagcaa
gcatctcaagttgcaggaagagctgcagaagctttacgtcagtcacgaatgctcagaagc
catgatagtgtatctgttcccacttggacaggaaggtcaggaactgctggtgcaccatca
tctgttcgtcggaagtttggttcaactgtgaatcccctgttggtaaataaaagcaaggga
actacgaagttaaatggattcgctgctggggcatcggctggtaaagcattatcttctgtc
gaactattagctcaaattcgaggtaaccaagagaaagccattggtgccgggctggaacat
cagtctagtatgttatcaagttccacgaatcaagcaagatctttagatgttagatcttcc
agggctactgcaagttcatctggattacaacctgaagtattgattcggcaaatctgcact
tttatacaacagcgagggggtagttctgattcagccagcatagttcagtatttcaaggaa
cgtattccctcacaagatcttgccctgttcaagaatctgttgaaggaaattgcgactctg
cataaaggatcaaatggatctcattgggttctgaaaccagactatcaattctga
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integrated database retrieval system