Vigna unguiculata (cowpea): 114191040
Help
Entry
114191040 CDS
T06017
Name
(RefSeq) polyadenylation and cleavage factor homolog 4-like
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114191040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vun03021
]
114191040
03019 Messenger RNA biogenesis [BR:
vun03019
]
114191040
Transcription machinery [BR:
vun03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114191040
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
114191040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_PCFS4
CID
Pcf11_C
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
114191040
NCBI-ProteinID:
XP_027935989
LinkDB
All DBs
Position
7:36494296..36501732
Genome browser
AA seq
968 aa
AA seq
DB search
MFSQNLILPPENPRPAAASFASKPMSNEIAIAAQKPPPSILVGRFKALLKQRDDELRLVA
GVPVPPPTTDEIVQIYDLLLSELTCNLKPIITDLTIIAEQQREHAKGIADTICTRILEVP
ADQKLPSLYLLDSIVKNFGQEYIKYFSLRLPEVFCEAYRQVQPSLHPAMRHLFGTWSKVF
PPSVLRKIEAELQFSVAVNTQSSTLNAVRASESPRPSHGIHVNPKYLRQLDHSTVDSVGA
EKLDSSGNANNTNFGILGSKTHQILSGSSRLGISSSPSRSGHDRHLSAPMDEYAADSSAN
RLIERDSPHPAVDYGVGKAIGRDMELSEWQRKQYGGDGRNRFPTSITYSLSNGHQRQSPR
ALIDAYGSDKSQETSSTKPLLVERLDRNGIDNKVLPTSWQNTEEEEFDWEDMSPTLTDHS
RNNSILASTIGFTRERPVVAANAALSEHDSRKGVWSSGSQLPPVDDSSAVAEDAFASLGF
RRAPLGQVPGFQNHVNHSLGSSHHLSNSSQHIFGNRGRARTLTYPPIDNIHNADTNPYRV
RPALSRMVSGRVSNVEPRPSVLPATLEIRPSVNLNVTRPPALNPINPLQKHVRSQFESLH
TSNPIVNHVNKSSFMPEQSFDSVENKDASILKIHQLPNQLPGLLSSNQQNLRQAPQLQFF
PPSQDSSNSQFSHGSSLQGHGSSISTAMSNPLPVMPFHLPLQNVANNPLHLQGGVRPPLP
PGRPPAPSQMIPHPNASPFMSSQQPSVGYTNLISSLMSQGVISLANQLPAQDSVGIEFNP
DILKLRYESAVNALYGDLPRQCTTCGLRFKCQEEHSSHMDWHVTKNRMSKSRKQKPSRKW
FVSDRMWLSGAEALGTESVPGFLPTETIEEKIDDEELAVPAEEDQNTCALCGEPFDEFYS
DEMEEWMYRGAVYLYAPTGTTAGMDRSQLGPIIHAKCRSESNMAPSEDLGPDEKGGDEEG
TQRKRRRS
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgttctcccaaaatctgattctccctcccgaaaaccctagaccagcggcggcttcgttc
gcttcaaaacccatgagcaatgagatcgcaatcgctgcgcagaaacctccaccgtcgatt
ctcgttggccgcttcaaggcactcctcaagcagcgtgatgacgaactcagactcgtcgca
ggcgtccccgttccgccccccacaacagatgaaatcgtccagatttacgacctccttttg
tcggaactcacctgtaatttgaagcctatcatcaccgatctcacaatcatcgccgaacag
cagagggagcacgccaaaggcatcgctgatacaatttgcactcggattctcgaggtgcca
gcagatcaaaagctcccctcactctatttgttggacagtattgtgaagaattttgggcaa
gaatacattaaatacttctctttacgtctgccagaagttttttgtgaggcatacaggcag
gttcagcctagtttgcatcctgctatgcggcatctttttgggacctggtcaaaagttttt
cccccttctgtcctacgcaagattgaagctgaattgcaattttccgtagcagttaatacc
caatcatccaccctgaatgctgtaagggcttctgaatctcctcggcctagtcatggcata
catgttaatcccaaatacctgcgccagttggatcactcaaccgtggatagtgttggtgct
gaaaagttggattcatcaggaaatgccaataatacaaactttggcattctaggtagtaag
acacaccaaattttgtcaggcagtagcaggctgggaatatcctcttccccttcaagaagt
ggacatgataggcatttgtctgcacccatggatgagtatgcagctgacagttctgctaac
agattaattgagagagactctcctcatcctgctgttgattatggagtaggcaaggcaata
ggtagagatatggagttgagtgaatggcaacgaaagcagtatggtggtgatggtcgtaat
aggtttccaacttctatcacatacagccttagtaatggacatcagcgtcaaagtccaaga
gctttaatcgatgcatatggcagtgacaaaagtcaagaaacttcaagtactaagcctttg
ctagttgaacggcttgatagaaatggtatagacaacaaggtattgcctacatcatggcag
aataccgaagaggaggagtttgattgggaagatatgagtccaaccttgactgatcatagt
aggaataacagtatattggcttcaactattggattcaccagggaaaggcctgttgttgca
gctaatgccgctttgtcagagcatgattccaggaagggggtttggtctagtggatctcag
cttcctccagtggatgattcttctgctgtagcagaagatgcatttgcttctttgggtttt
cgacgagcaccactgggacaggtacctggattccaaaatcatgtcaatcatagtctcggt
tcttctcatcatctgtccaactcgtcacaacatatctttggtaataggggtcgggcaaga
actcttacatatcctcctattgataacattcacaatgccgatacaaatccatatcgggtt
cgacctgcattatcaaggatggtttctggccgtgtctctaatgtagaacctagaccatca
gttttgcctgcaactcttgaaataaggccttctgtaaatttgaatgtcactcgaccacct
gcattaaatccaataaatccattacaaaaacatgttaggagtcagtttgaatctttacat
actagtaaccctattgtgaaccatgtaaataaatcttcatttatgccagagcaatcattt
gacagtgttgagaacaaggatgcaagtattttgaagatacatcagttgcctaatcagctt
cctggactactttcgtccaaccagcaaaatctcaggcaagcaccacaactgcagtttttc
ccaccatctcaggattcgtcaaactcacaatttagtcatgggagttctttgcagggacat
ggttcttctataagtactgccatgtcgaatccgttacctgttatgccattccatttgcca
ctccaaaatgttgcaaataaccctttacatttacagggtggagtccgtccacctttacct
ccaggtcgccctcctgctccctctcaaatgatacctcatccaaatgctagtccatttatg
tcaagccaacagccaagtgttggatatacgaatttaattagttccctaatgtctcaaggt
gtaatctcattggccaaccagctgcctgcacaggattctgttggaattgagttcaatcca
gatattctgaagcttcgttatgagtctgcggtcaatgccttgtatggtgatctcccaaga
caatgcacaacttgtggactccgattcaaatgccaagaggaacacagtagtcatatggat
tggcatgtgacaaagaatcggatgtctaaaagccggaagcagaaaccctctcggaagtgg
tttgtgagtgacaggatgtggcttagtggtgcagaggcattgggaactgagtcagtccca
ggttttttgcctacggaaaccatagaagaaaagatagatgatgaagagttagctgttcca
gcagaagaggatcagaatacttgtgcattatgtggagagcctttcgatgagttttacagt
gatgaaatggaggaatggatgtatagaggagctgtatacctctatgctcccacggggaca
acagcaggcatggacaggtcacagttaggccccataattcatgctaagtgcagatcagaa
tctaatatggcaccatctgaagatcttgggccggatgaaaagggtggtgatgaagagggt
acccaaaggaagcgaaggcgtagttga
DBGET
integrated database retrieval system
