Vigna unguiculata (cowpea): 114191043
Help
Entry
114191043 CDS
T06017
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114191043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114191043
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114191043
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
114191043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
ECR1_N_2
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
114191043
NCBI-ProteinID:
XP_027935992
LinkDB
All DBs
Position
7:27167911..27170610
Genome browser
AA seq
197 aa
AA seq
DB search
MEEEKEAVMVTPGEVLGRSSDVKAGRGAYAAPHNNTVYASLTGFRRTIPPPPDSPDKRPT
VEVTGHKAHGPVPQPGSIVIVRVTKVMARSASADIMCVGSKCVREKFTGIIRQQDVRATE
IDKVDMHLSFHPGDIVKALVLSLGDARAYFLSTAKNELGVVSAESIAGATMVPVSWTEMQ
CPVTGQIEQRKVAKAAS
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagagaaagaagcagtgatggtaacaccgggagaagtgttgggaagaagcagc
gatgtcaaagcagggagaggagcatacgcagcgcctcataacaacaccgtttacgcctcc
ctaaccggcttccgccgtaccattcctccgccgccggactctcctgacaagaggccgact
gttgaagtaactggtcacaaggcgcatggacctgttccacaacctggatctattgtcatt
gtgcgggtcaccaaagtgatggctcggtccgcttctgctgatattatgtgtgttggatct
aagtgtgttcgagaaaaatttaccggcattatcagacagcaagatgttagagctacagaa
attgataaagtagacatgcacctgtcttttcatcccggtgatatagttaaagctcttgtg
ctttctcttggagatgcacgggcgtactttctatctactgcaaagaatgaactcggtgtt
gtttctgcagaaagcattgctggtgcaaccatggttccagtaagttggactgagatgcag
tgccctgtaactggacaaatcgagcaaagaaaggttgcaaaggctgcaagctga
DBGET
integrated database retrieval system
