Vigna unguiculata (cowpea): 114191489
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Entry
114191489 CDS
T06017
Name
(RefSeq) pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114191489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vun03041
]
114191489
Spliceosome [BR:
vun03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
114191489
Complex C
U4/U6.U5 tri-SnRNP related factors
114191489
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Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
114191489
NCBI-ProteinID:
XP_027936477
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Position
7:complement(25287637..25290727)
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AA seq
388 aa
AA seq
DB search
MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRILGAFYLRITGSDIDVYRYL
EPLYNDYRKLRRKLSDGQFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESLNSLEPR
RSALEEDFEEEEEKEDNEQPVDEIEDRAYEKDYYRGRSPTRERDRDRRRDSHRYRDRDYD
RDYDRDYDREHDRERGRGRDRDRDRDRERDRDRYRLRDEKDYGREREGRERERRERDRDR
GRRRSHSRSRSRSRDRKEHDGGDYRKRHARSSVSPRRHGDGLEDGEPKKKKEKKEKKEKK
DDGTDHPDPEIAEANKLRAALGLKPLKL
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcgtacggacccagcagcaaagagtatcagagggacgaaccctcaaaacctg
gtggagaagattctccggtcgaagatctatcagaacacgtactggaaggagcaatgtttc
gggttaacggcggagaccttggtggacaaggccatggaactggaccatctcggcggaact
tacgggggaaaccgtaaacctacgcctttcatgtgcctcgtcatgaagatgctccagatt
cagccagagaaagaaatcgtcatcgagttcatcaagaacgaggattacaaatacgttagg
atactcggcgcgttttacttgcgtatcactggatctgacattgacgtctaccgctacctt
gaacccttgtacaatgactatcgcaaactccggcgaaagttatctgatggacagttttca
ttgacccatgtggatgaggtcatcgatgaacttctcacaaaagattattcatgtgatatt
gctttgcctcgcgtcaagaaaagatggactcttgaatctttgaattcattggaacctaga
cgaagtgcacttgaagaagattttgaggaggaagaagagaaagaggataatgagcagcct
gttgacgagattgaagatagggcctatgagaaggattattatcgtgggcgaagcccaaca
agggaaagagacagggacagaaggcgtgatagtcatagatacagggaccgtgactatgac
agagactatgacagagattatgatcgagagcatgatcgggagcggggacgtggcagagat
agagacagggacagagatagggagagagacagggatcgatatcgtctaagggatgaaaaa
gattatggtcgtgagagagaaggtagggagcgggagaggagagagagggatcgcgaccgt
ggaaggcgaaggagccactccaggagtcgaagtaggagtagggatcgcaaggaacatgat
ggtggtgactacagaaagagacatgctagaagtagtgtaagccctagaagacacggagat
ggacttgaggatggtgagccaaagaagaagaaggagaagaaagaaaagaaagaaaagaag
gatgatggaactgatcacccagatcctgagattgcagaagcgaacaagctccgagcagcc
ctgggtttgaaaccgctgaagctctga
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