KEGG   Vigna unguiculata (cowpea): 114191489
Entry
114191489         CDS       T06017                                 
Name
(RefSeq) pre-mRNA-splicing factor 38
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
vun  Vigna unguiculata (cowpea)
Pathway
vun03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vun00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114191489
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vun03041]
    114191489
Spliceosome [BR:vun03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    114191489
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    114191489
SSDB
Motif
Pfam: PRP38 PRP38_assoc HIND
Other DBs
NCBI-GeneID: 114191489
NCBI-ProteinID: XP_027936477
LinkDB
Position
7:complement(25287637..25290727)
AA seq 388 aa
MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRILGAFYLRITGSDIDVYRYL
EPLYNDYRKLRRKLSDGQFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESLNSLEPR
RSALEEDFEEEEEKEDNEQPVDEIEDRAYEKDYYRGRSPTRERDRDRRRDSHRYRDRDYD
RDYDRDYDREHDRERGRGRDRDRDRDRERDRDRYRLRDEKDYGREREGRERERRERDRDR
GRRRSHSRSRSRSRDRKEHDGGDYRKRHARSSVSPRRHGDGLEDGEPKKKKEKKEKKEKK
DDGTDHPDPEIAEANKLRAALGLKPLKL
NT seq 1167 nt   +upstreamnt  +downstreamnt
atggcgaatcgtacggacccagcagcaaagagtatcagagggacgaaccctcaaaacctg
gtggagaagattctccggtcgaagatctatcagaacacgtactggaaggagcaatgtttc
gggttaacggcggagaccttggtggacaaggccatggaactggaccatctcggcggaact
tacgggggaaaccgtaaacctacgcctttcatgtgcctcgtcatgaagatgctccagatt
cagccagagaaagaaatcgtcatcgagttcatcaagaacgaggattacaaatacgttagg
atactcggcgcgttttacttgcgtatcactggatctgacattgacgtctaccgctacctt
gaacccttgtacaatgactatcgcaaactccggcgaaagttatctgatggacagttttca
ttgacccatgtggatgaggtcatcgatgaacttctcacaaaagattattcatgtgatatt
gctttgcctcgcgtcaagaaaagatggactcttgaatctttgaattcattggaacctaga
cgaagtgcacttgaagaagattttgaggaggaagaagagaaagaggataatgagcagcct
gttgacgagattgaagatagggcctatgagaaggattattatcgtgggcgaagcccaaca
agggaaagagacagggacagaaggcgtgatagtcatagatacagggaccgtgactatgac
agagactatgacagagattatgatcgagagcatgatcgggagcggggacgtggcagagat
agagacagggacagagatagggagagagacagggatcgatatcgtctaagggatgaaaaa
gattatggtcgtgagagagaaggtagggagcgggagaggagagagagggatcgcgaccgt
ggaaggcgaaggagccactccaggagtcgaagtaggagtagggatcgcaaggaacatgat
ggtggtgactacagaaagagacatgctagaagtagtgtaagccctagaagacacggagat
ggacttgaggatggtgagccaaagaagaagaaggagaagaaagaaaagaaagaaaagaag
gatgatggaactgatcacccagatcctgagattgcagaagcgaacaagctccgagcagcc
ctgggtttgaaaccgctgaagctctga

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