Vigna unguiculata (cowpea): 114191662
Help
Entry
114191662 CDS
T06017
Name
(RefSeq) LOW QUALITY PROTEIN: protein indeterminate-domain 5, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vun03000
]
114191662
Transcription factors [BR:
vun03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
114191662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
114191662
NCBI-ProteinID:
XP_027936787
LinkDB
All DBs
Position
7:complement(39124518..39131468)
Genome browser
AA seq
571 aa
AA seq
DB search
MAASSSSASLFGFREDDQNQMKQQHSLTPSSSATPAAPPQKKKRNQPGTPYPDAEVIALS
PKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEPKRKVYLCPEPTCVH
HDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTL
FSRRDSFITHRAFCDALAQESARQPPNLGAAIGTHLFGTTANTIPLNLSQVASHISNIQD
PNTQPTELLRLGGAAAARTSQFDHLLGSPFRPSQQQPPFFMEPNQNYHPDQQQGLLQNKP
FQQGLMQIPDHLTNTNSPFNLPFLSNTTNNASFSENFNTTNNNTSNNNEGNNFFTTSSAP
SLFSNNNNNNVVSSNVNANALSHMSATALLQKAAQMGASSSNSTASLLKSFGSASSSSGS
KSEQHRPLVNAANYGGGMFGGNVNEQGNSNLQDLMNSFAVSGTSSIFEGGFEAYDHNSNN
NNREGKVHAMSGSSSMGGSDRLTRDFLGVGQIVRGMSGSGGVAQREQQQQQHGFNLSSLE
ADQRNNSNSNNNNNNAAPSGQAFGGGGGNFQ
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcggcatcatcttcctcagcatcactctttggcttcagagaagacgatcagaaccag
atgaagcaacagcattccttgacaccatcttcgtcagcaacaccagctgcaccaccccag
aagaaaaagagaaaccaacctggaacaccatatccagatgcggaggtgatagcactatct
cccaagaccctaatggcaacaaacaggtttatatgtgaggtgtgtaacaaagggttccaa
agggagcaaaacctacagctacacagaagaggacacaacctgccttggaagcttaagcag
aagactacaaaagagccaaagagaaaggtttatctgtgtcctgagcccacatgcgtccac
catgacccttcaagggctcttggagacctcacagggattaagaaacactactctcgcaaa
cacggtgagaagaagtggaagtgcgacaagtgctctaagaaatatgctgttcaatctgat
tggaaagcccattctaagacttgtggcaccagagaatatcgatgtgattgtggcacactc
ttctccaggagggacagtttcatcacccacagggcgttctgcgatgcacttgctcaagag
agtgcaagacagccaccgaaccttggcgccgctatcggcacccacctcttcggaaccacc
gccaacaccatccccctgaacctttctcaggttgcttctcacatttccaacatccaagac
cccaacacccaaccaacagaactcctccgcctcggtggcgccgccgccgccagaacctcc
caattcgaccatctcctaggttctcccttcagaccctcccaacaacaaccacccttcttc
atggaacctaaccaaaactaccaccccgaccaacaacaagggctactccaaaacaaaccc
ttccaacaaggactgatgcagatccctgatcacctcaccaacaccaactcacccttcaac
cttcccttcctttcaaacaccaccaacaatgcttcattctccgaaaacttcaacaccacc
aacaacaacaccagcaacaacaacgaaggcaataacttcttcacaacctcaagcgctcct
tctctcttcagcaacaacaacaacaacaacgttgtcagctcaaacgtcaatgccaatgca
ctgtctcacatgtccgcaactgcactgcttcagaaagccgctcagatgggtgcatcttcg
agcaacagcaccgcttcgctgctgaaaagcttcggaagcgcgtcctccagcagcggctca
aagtccgagcaacacaggccactggtgaatgctgcaaactacggcggcggaatgttcgga
gggaacgtgaacgaacagggtaacagcaacctgcaagatctgatgaactcgttcgctgtt
agtggaacctcttccattttcgaaggtgggtttgaagcgtatgatcataacagtaataat
aacaacagggagggaaaagtgcatgcaatgagtgggagcagcagcatgggggggtccgat
agactcacccgcgactttctgggtgtgggtcagattgttagaggcatgagtgggagtgga
ggagttgcacagagagaacaacagcaacaacaacatggcttcaacttgagttctttggaa
gcagatcaaagaaataacagtaacagcaataataataacaacaatgctgcgccgtcaggt
caagcttttggaggtggtggagggaattttcagtga
DBGET
integrated database retrieval system
