Vigna unguiculata (cowpea): 114191894
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Entry
114191894 CDS
T06017
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114191894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vun03036
]
114191894
Chromosome and associated proteins [BR:
vun03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
114191894
SWR1 complex
114191894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
114191894
NCBI-ProteinID:
XP_027937141
LinkDB
All DBs
Position
7:complement(2331600..2349153)
Genome browser
AA seq
2048 aa
AA seq
DB search
MASKGPRSKIDHESRAKRQKALEAPREPRRPKTHWDHVLEEMAWLSKDFESERKWKLAQA
KKVALRASKGMIDQATRGEKKMKEEEQRLRKVALNISKDVKKFWTKIEKLVLYKHQMELD
EKKKKALDKQLEFLLGQTERYSTMLAENLVDAHKSGENNSAEHHMSIQHKDGHGDVINEP
KEADVVEYQSDAADNDDEYDVQSDDESEDDEQTIEQDEAFITKEERQEELEALHNEMDVP
IEELLKRYEGEKGESVMKESSPEHSEDVEKIVRTAGDGKKILASENGDDHLSVSKIGTNN
SSMVSGRRCDESNGDVATPTKNLSQFEEGQSEDLKEVPRETANEDFAYDFTDEEEDGDFL
LGTEDKDDETTLSEEEKLERVDAIDPKDEIALLQKESDMPVEELLARYKRDPSDNEDGGY
ETDYASALSEDHSDSPVHEDAGQKDSGIPMDEDIKSGEHLATTQSQAEEHWESPHENLDQ
RESEHIIADAAAAARSAQPTGNTFSTTNVRTKFPFLLKYSLREYQHIGLDWLVTMYEKRL
NGILADEMGLGKTIMTISLLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILT
YFGSAKERKLKRQGWLKPNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQ
RWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPISGMVEG
EEKINKEVVDRLHNVLRPFLLRRLKRDVEKQLPMKHEHVIYCRLSKRQRNLYEDFIASSE
TQATLASANFFGMISIIMQLRKVCNHPDLFEGRPIVSSFDICGIDIQLSSSVCSMLLPSP
FSVVDLRGLGLLFTDLDYSMAAWESDEVQAIETPATSIMERTDIDELEVIRPLKCQKKLQ
GTNIFEDIHKKIWEERLKQAKERAAAIAWWNSLRCKKRPMYSTTLRDLVTLRHPVYDIHM
VKANPTSYMYSTKLADIVLSPIERFQKMTDVVESFMFAIPAARAPSPVCWCSKSETNVFL
QPSYKQKCSEVLLPLLSPIRPAIVRRQVYFPDRRLIQFDCGKLQELANLLRKLKSEGHRA
LIFTQMTKMLDILEAFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPKYFLFILSTRSGG
VGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISDSTIEENILKKANQ
KRALDNLVIQSGGYNTEFFKKLDPMELFSGHRTLSIKSMLKEKNQNTGEVSVTNADVEAA
LKCVEDEADYMALKKVELEEAVENQEFTEEAIGRLEEDEYVNEDDETPELGESVSNLNKE
NGLVLNGSENKEDRPPNSVAVKEDDADVLADVNQMAAAAAAAGQAISAFENELRPIDRYA
IRFLELWDPIIDKTALESEVRIEDTEWELDRIEKYKEEMEAEIDEDEEPLVYESWDADFA
TMAYRQQVEALAQHQLMEELEYEARLKEAEEEACDSKKTTPGDLKPKPKKKPKKAKFKSL
KKGSLTSGLKPVKEESQAEPMNIDDEDITGMEFVSPNSSMQKKRKSKATTDGEEKRLKKS
KKSKRDPPDIYASDLESNALVVQYEHAESKTCESLADFEPKTAGRGKMGGKISIIPMPVK
RIWTIKPEKMRKGNHWSKDCIPSADFWLAQEDAILCAVVHEYGPNWSLVSDILNSMTAGG
SYRGRYRHPVHCCERFRELFQKNVLSMDNANNEKTITPGSGKALLKVTEDNIRMLLDVAS
EQANRELLLQKHFFALLSSAWKVASHVDRRQNPSPTCNGLYFDQSLFTSIGQPSQNSLKK
SSERVPFANLVQSKKLVAAALDDSATGQVNDKVILPNQGEGMPMSADRLDITLEFPKEES
DVLALFPSVINLSIHGTEPTPSLSKQTGGDDFKIGLLIAENRFREATRICEEDVSGWASS
AFPTSDARSRPGSRIQSSGKQKSSISDSAKPSRSKSKRASIDASEMHHHQADSIFQSVPL
LKDLRFDLAPFTTDEIGLTAVDTLFPFDLNVESSWEMEGVGMIPHDYVTGLISDLDDCTT
FPEYTDIR
NT seq
6147 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaaaggtcccaggtctaagattgatcacgagagcagagccaaacggcaaaag
gctcttgaagctccaagggagcctcgccgacccaaaactcattgggaccatgtcttagaa
gaaatggcgtggttatcaaaggattttgaatcagagaggaaatggaaattagctcaggca
aagaaagtagctttaagagccagcaaaggcatgatagatcaggctacaaggggtgaaaag
aagatgaaggaagaagaacagcggttaagaaaggttgcactaaatatttctaaggatgtt
aagaaattctggacaaaaatagaaaagctggttctttacaaacatcaaatggaactagat
gaaaagaagaaaaaggcacttgacaaacagcttgagtttttattagggcaaacagagagg
tactcaacaatgctggcagaaaatcttgtggatgctcataaatcaggagagaataattct
gcagagcatcacatgagtattcaacacaaagatgggcatggagatgttattaatgaacct
aaggaagctgatgtcgtggagtatcaatcagatgccgccgacaacgatgatgaatatgat
gtacaatctgatgatgaatcggaggatgatgagcaaacaattgagcaagatgaggctttt
attactaaagaagagagacaagaggaattggaagctttgcataatgaaatggatgttccg
attgaggagttactcaaacgttatgaaggggagaaaggagaatctgtgatgaaagaaagt
agtccagagcatagtgaagatgttgagaaaatagtaagaacagctggtgatggtaagaaa
atattggcatcagaaaatggtgatgatcatttatctgttagcaaaattggtacaaacaac
tccagtatggtctctggtcgacgttgtgatgaaagtaatggtgatgttgctacaccaaca
aaaaatctgtctcaatttgaggaaggtcaatctgaagatctaaaagaggttcctagagag
acagccaatgaagattttgcgtatgattttactgatgaagaggaagatggtgactttttg
cttggcacagaagacaaggatgatgaaacaaccttatcagaggaggaaaaactcgaaaga
gttgatgcaatagatcccaaggatgagattgcattattacaaaaggagagtgacatgcct
gtcgaggaactgcttgcaaggtataaaagggacccgagtgacaacgaagatgggggatat
gaaactgattatgcttctgctttatccgaagaccattcagactctcctgtccatgaagat
gccgggcaaaaggattctggcattcctatggatgaagatataaagtctggtgaacacctg
gctaccacacagtcccaagcagaagaacattgggaatcacctcatgaaaatttggatcaa
agagaaagtgagcatataattgctgatgcagctgctgctgcaagatcagcacaacctact
ggaaacaccttctccacaactaatgtgcgtacgaagttcccttttctactcaagtactct
cttcgtgagtatcaacatattggattggattggcttgtcaccatgtatgaaaaaagactg
aatggaattttggcagatgaaatgggtcttggaaaaacaattatgactatatctttgctt
gcacatcttgcttgtgaaaaaggaatttggggtccgcatttaattgtggtaccaactagt
gtaatgcttaactgggagaccgaatttttgaaatggtgtcctgcctttaaaattttgact
tattttggaagtgcaaaggagcgaaagcttaaaaggcaaggatggttaaaaccaaactcg
tttcatgtatgcataactacttatagattagttattcaggactccaaagttttcaagcgc
aaaaagtggaaatatttgatcttagatgaagctcatctcattaaaaactggaagtcacaa
aggtggcagacactcttgaatttcaattcaaaacggcggattctcttgactggtacacca
ctacagaacgatctgatggaactgtggtctctcatgcatttcttaatgccccatgttttc
cagtcgcatcaagagtttaaggattggtttagtaatcctatatcagggatggtagaggga
gaagaaaaaattaataaggaggttgttgaccgcctgcacaatgtccttcgtcccttttta
ctccgtcgactgaagcgagatgtggaaaagcaacttccaatgaagcatgaacatgtcata
tattgtagactatcaaagaggcagcggaatttgtatgaggatttcattgctagctcagag
actcaagcaactctagcaagtgccaatttttttgggatgattagtattatcatgcaactt
cgtaaagtttgcaatcatcctgacctatttgagggtcgtcctattgtcagttcgtttgat
atatgtggtattgatattcagttaagttcttctgtttgctctatgcttttgcctagtccc
ttttcagtggtggacctaagaggtttgggtcttttattcactgatcttgactatagtatg
gctgcttgggaaagtgatgaagtacaagctattgagactcctgcaacctcaatcatggaa
cgtactgacatagatgagctagaagtaattaggccactaaaatgtcaaaaaaaattgcaa
ggaacaaacatttttgaagacatccataagaaaatctgggaagagaggctaaaacaggca
aaggaacgtgcagcagctattgcatggtggaactccttgagatgtaaaaagagacctatg
tactcaacaactctgagggaccttgttaccttaaggcatcctgtatatgacattcatatg
gtgaaagcaaaccctacttcgtatatgtactcaacaaagctagctgacattgttctctcc
cccattgaacgatttcaaaagatgactgatgtggttgaaagcttcatgtttgcaattcca
gctgcacgggcaccctctcctgtttgctggtgcagtaaaagtgagacaaatgtgtttctg
cagccatcttacaagcagaagtgctctgaagttttgttgccgctactgtcaccaattcga
ccagcaattgttcgccgacaagtgtatttccctgataggcgtcttatacaatttgactgt
gggaaactgcaggaactggcaaatttgttgagaaaattaaaatcagaaggtcaccgagct
ttgatattcacccagatgacaaagatgcttgacatattagaggcattcattaatttgtat
ggctatacatacatgcgcttggatggatcgacccaaccggaggagagacagaccttaatg
caacgctttaacacaaaccccaaatattttcttttcatcttgtcaacccgtagtgggggt
gttggtatcaatctagttggagctgacacagttattttttatgatagtgactggaatcct
gctatggatcaacaggcacaagatcgatgccatagaattggtcagacacgtgaagttcat
atttatagattgattagtgacagcaccattgaggagaatattttgaagaaagcaaatcag
aagcgtgcacttgataatctagtcatacaaagtgggggttataatactgagttcttcaag
aagcttgatcctatggaactattttcaggtcatagaacactttcaataaaaagtatgctg
aaggagaaaaaccagaacactggggaagtttctgtaacgaatgcagatgtagaggctgca
ttgaaatgtgttgaagatgaggcagattacatggctttgaagaaagttgaactggaagag
gctgtggaaaaccaggagtttactgaagaagccattgggagacttgaggaggatgaatat
gtaaatgaagatgatgaaactccagaattaggtgaatctgtttcaaacttaaataaagag
aatggcttggtattaaatggaagtgagaataaggaagatagaccaccaaactctgttgct
gtcaaagaagatgatgctgatgtgctggctgatgtgaaccagatggctgcagctgcagct
gcagctggacaagctatttcagcatttgaaaatgagctacgccctattgatcgatatgcc
attcgctttctggaactgtgggatccaattatagataaaacagccttggaatctgaagtc
aggattgaggacacagaatgggagttggatcggatcgaaaagtacaaggaggagatggag
gctgaaattgatgaagacgaggaacctcttgtatatgaaagctgggatgctgattttgca
accatggcatatcggcagcaagtagaggccttggctcaacatcagttgatggaggaactt
gaatatgaagctagactgaaagaagctgaggaagaagcttgtgattctaaaaagacaaca
ccaggggatttgaaacccaaacctaaaaagaagcccaagaaggcaaagttcaaatctcta
aagaaaggatctttaacttctggattgaaacctgtgaaagaagagtcacaagcagagcca
atgaacatagatgatgaggatatcactggtatggaatttgtgtctccaaattcatccatg
cagaaaaaacgtaaatctaaagcaacgactgatggtgaagaaaagagacttaagaagtcc
aaaaagtccaagagggatcctcctgacatttatgcgtctgatttagaatccaatgcttta
gttgtgcaatatgaacatgcagaatcaaagacttgtgaaagtctggctgattttgaaccg
aaaacagcaggcaggggtaagatgggaggaaaaatatccatcattcctatgcctgttaaa
cggatctggacaataaaaccagaaaaaatgagaaagggaaatcattggtccaaagattgt
attccatcagctgatttttggcttgctcaggaggatgctatattatgcgctgttgttcat
gaatatggtcctaactggagtttggttagcgatattcttaatagcatgactgctggtggg
tcatacagggggagatatcgacatcctgtccattgctgtgagcggtttagagaactattc
cagaagaatgtattgtcaatggacaatgcaaataatgagaagaccatcactcctggctct
ggaaaggctcttcttaaagttacagaggataacatacggatgctgttagatgttgcttct
gagcaggcaaatagggagttgctgctgcagaagcacttttttgcattgctttcatctgcc
tggaaggtggcatcacatgttgaccgcaggcaaaatccatcacccacctgtaatggtctc
tattttgatcagagtctttttacttccataggccagccttcgcaaaattccttgaagaaa
tcctctgaaagagtgccatttgcaaatttggtccagagtaagaagttagtagcagctgca
cttgatgattctgcaactgggcaagtgaatgataaagtcatcctccctaaccaaggggaa
ggcatgccaatgagtgctgataggttggatattactctggaattcccaaaagaagagagt
gatgtcttagctttgtttccatctgttataaacttatcaatacatgggactgaaccaaca
ccatctttaagtaagcaaacaggaggagatgacttcaaaattggtctgcttattgccgag
aatcgtttcagggaggcaacaagaatttgtgaagaagacgtctctggatgggcatcatct
gcattcccaaccagcgatgcaaggtctcgacctggatccaggatacaatcctctggaaag
cagaagtcttccatatctgactctgctaagccttctaggtcaaagtccaagagagcatca
attgatgccagtgaaatgcatcaccatcaggctgactcaatattccagtcagtgccatta
cttaaggatcttagatttgatctcgctccattcactacagatgaaattggacttactgct
gtggatacacttttcccctttgacctgaatgttgaaagttcatgggaaatggagggtgtt
ggcatgatcccacatgattatgttactggtttaatctcagaccttgatgattgtacaaca
ttccctgaatatactgacattagataa
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integrated database retrieval system
