Vigna unguiculata (cowpea): 114192379
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Entry
114192379 CDS
T06017
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vun04131
]
114192379
04121 Ubiquitin system [BR:
vun04121
]
114192379
Enzymes [BR:
vun01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114192379
Membrane trafficking [BR:
vun04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
114192379
Ubiquitin system [BR:
vun04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114192379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_11
zf-rbx1
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
CxC4
zf-Nse
DUF2015
Stm1_N
Rad50_zn_hook
zf-RING_16
DZR
Motif
Other DBs
NCBI-GeneID:
114192379
NCBI-ProteinID:
XP_027937886
LinkDB
All DBs
Position
7:4294439..4296914
Genome browser
AA seq
310 aa
AA seq
DB search
MSNSRNTHWCYSCRRPVRLGRRDVVCPSCNEGFVHELNDMVHVNPFDLFGMDNNEERDQR
VGLMETFSAFMRHQMADRGRSRDIIRAQTDSNAEHSAGYAPLLIFGGQIPFRLSGHGGFE
ALFNGAPGIGLTRGNTGDYFVGPGLEELFEQLSANNRQGPAPASRSSIDAMPTIKITQRH
LRSDSHCPVCKDRFELGSEARQMPCNHLYHSDCIVPWLVQHNSCPVCRQELPPQGLNLSS
NNRGTNGRSRSGRVSSSGRESQGRRNPFSFLWPFRSSHSSSNDEATGSSTQAPTIPENSH
HAGYSGWPFE
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatagtaggaacacacattggtgttacagttgcaggaggccggttcggctggga
aggcgagatgtggtttgtcctagctgcaatgagggatttgttcatgaacttaatgatatg
gtgcatgtgaatccttttgatttgtttggaatggacaacaatgaagaacgagatcaaagg
gttggactcatggaaaccttctctgcttttatgaggcatcaaatggcagacaggggcaga
agtcgtgacatcatcagggcacaaacagattcaaatgctgaacacagtgcagggtatgct
cctctgttgatctttggtggccaaatacctttcagattgtctggccatggtggctttgaa
gctctctttaacggggcccctggaattggtctcacacgaggtaacacaggtgattatttt
gttggtcctggacttgaagaactgtttgaacagctttcagctaataacaggcaaggtcca
gcaccagcatcaagatcctcaattgatgctatgcctactatcaagatcacacagaggcat
cttcgatcagactcacattgtcctgtgtgcaaagatagatttgagctggggtctgaagca
agacaaatgccatgcaaccatttgtatcactcagattgcattgttccatggttggtccag
cataactcctgccccgtttgtcgccaagaactgccaccacaaggattgaatttgagtagt
aataaccgaggcacaaatggtagaagtagaagtggaagggtaagtagtagtggtagggag
agccagggaaggagaaatccattttcctttttgtggccttttcgttcttctcattctagc
agtaatgatgaagcaaccggaagcagcacacaagcaccaaccatcccagagaatagccat
catgcagggtattctgggtggccatttgaatga
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