Vigna unguiculata (cowpea): 114192458
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Entry
114192458 CDS
T06017
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vun03000
]
114192458
03036 Chromosome and associated proteins [BR:
vun03036
]
114192458
Transcription factors [BR:
vun03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
114192458
Chromosome and associated proteins [BR:
vun03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
114192458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
zf-4CXXC_R1
Upf2
Motif
Other DBs
NCBI-GeneID:
114192458
NCBI-ProteinID:
XP_027937989
LinkDB
All DBs
Position
7:26908572..26943542
Genome browser
AA seq
1494 aa
AA seq
DB search
MEVKTEDEVVDIESASSDSFNDDSDDEESLVPEIDDGVHLEEPLTEEEIQDLISELLEVE
SKAAEAQEALEEESLSKVESEVRQELKQSLQGDDLETAVDDEMATFKEEWEAVLDDLETE
SAHLLEQLDGAGIELPSLYKLIEKEAPNVCSTEAWKKRNHWVGSVATSEIAESIADAEKH
LQVNRPVRRRHGKLLEEGASGFLQKKLCDETQEPVKNEAEGDWDMFNKIVSDGSGIDATF
GSKHWASVYLASTPQQAALMGLKFPGVDEVEEIDDVDGNSMDPFIAAAIANERELDLSDE
QRRQFKKVKEEDDAIVDKKLQIRLKHRRHKKISKQEEMSTPIQLTDSPTQKPSYADHLDP
DAKEGTNYNGKIVSDNGNDTCVLIETDNIKGFDASHHLDKEKLTSSDGLSDPPKSSVDGV
IEQRGIKRVSSGELDAENKKSRLVVIDSDDEAGVTKEKLDCITQQVKDELGKNGTGSLPS
ECLDEKFLCTVCDKVALEVHPHPLLKVITCGDCNRLLKEKAHEKDLRQDCSEGYCTWCGG
NSGLVSCKLCNILFCTKCLKKNIGVELVSETQATSWHCCCCHPNLLQRLSLQLEKAVGSA
SIVVSSSSSDSDDSDDSDNSDDSDDSDAQINVTMSSKRRPKKKIRRILDDAELGEETKRK
IAIEKERQERLKSLRGQFSASSIEMSPDGCNGNLSEGASVEVLGDALAGYIVNVVREKGE
EAVRIPPSISAKLKAHQISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIA
FLYTAMRCVDLGLRTALIVTPVNVLHNWRQEFLKWSPSELKPLKVFMLEDVPRDRRAELL
KKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTKAD
VTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHT
NSTLTDVKIMNQRSHILYEELKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRKLYKRF
LDVHGFTTQEHPEMLRKRCFFAGYQALARIWNHPGILQLTKEAKDYAKEEDAVENFLVDD
SSSDENSDYNVLAGEKMGFANDLLQRKDGNGFFLKGWWNDLLHGKIYKEIDHSGKMVLLM
EILTMSSDVGDKVLVFSQSIPTLDLIELYLSRTPRRGKRGKFWKKGKDWYRLDGRTVSSE
RQKLVERFNEPLNKRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRSWRY
GQTKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFAFGDDD
NPETLGDLGQENEHQENPISVGHPLKHTAPHSNGSSYSDKLMESLLSKHHPWWIAHYHEH
ESLLQENEDEKLSKEEQDMAWEVYRKSLEWEEVQRVPLGESIVPIQKPEIPNDVPHVSET
CNILPSKLSRRFASRKCTNLAHMLTLRSQGTKFGCSTVCGECAQEIRWEDLKKR
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atggaggtaaaaactgaggatgaagtggtggatattgagagtgcttccagtgattctttc
aatgacgattcagatgacgaggaatctttggttcccgaaatagatgatggagtgcatctt
gaggagccgttaacagaagaggaaatccaagatcttatttctgaattgttagaagttgag
agtaaggctgcagaggcgcaagaagctcttgaagaggagtctctttctaaagtagagagt
gaagttagacaagaactcaagcaaagtcttcaaggggatgatttggaaactgctgttgat
gatgagatggctacttttaaagaagaatgggaagctgttctggatgaccttgaaaccgaa
agtgcccacttactggaacaacttgatggggctggaattgaacttcctagcctttataag
ttgattgaaaaagaagctcctaatgtttgctccactgaagcttggaaaaagaggaatcac
tgggttggctctgttgcaacttcagaaattgctgagtcaattgctgatgcggagaagcat
ctacaagtaaacagacctgttagaaggcgacatggtaaattactggaagagggtgctagt
ggctttctccaaaaaaaactttgtgatgaaacccaggagccagtgaaaaatgaagctgag
ggtgattgggatatgttcaataaaatagtttctgatgggagcggcattgatgctacattt
ggcagtaagcactgggcttctgtttatttggccagcactccacagcaagcagccttgatg
ggactgaaatttcctggagttgatgaggttgaggagattgatgatgttgatggcaattct
atggatccatttattgcagctgccattgcaaatgaaagagaattagatctttctgatgag
caaaggagacaatttaaaaaggtcaaagaagaagatgatgcaattgttgataagaaactt
caaatccgtttgaaacataggaggcataaaaagataagtaaacaggaagaaatgagcaca
cctatccagttgacagacagccctacacagaagccttcatatgctgatcatttagaccct
gatgcaaaagaaggaactaattataatgggaaaatagtctctgacaatggcaatgataca
tgtgttcttatcgagactgataatattaaaggttttgatgccagtcatcatcttgacaaa
gaaaagcttacaagtagtgatggcttgtcagatccacccaaatcgtcagtggacggtgtt
attgaacagagaggaatcaaacgtgtaagcagtggtgagcttgatgctgaaaataaaaaa
tctcggcttgttgttattgatagtgatgatgaagcaggggtcactaaggagaaattagat
tgcattactcaacaagtaaaagatgaattaggtaagaatggtactggttctcttccttca
gagtgtctggatgaaaaatttttgtgcacagtttgtgataaagtggctcttgaagtgcat
ccacaccctctcttgaaagtaattacttgtggagattgcaatcgcttattgaaagaaaag
gcacatgaaaaggatctgagacaagattgttcggagggttattgtacatggtgtggagga
aacagtggattagttagttgtaaattatgcaatattttattctgcaccaagtgtttaaag
aagaatattggtgtagaattggtttctgaaactcaggccactagctggcattgttgttgt
tgtcatccaaaccttttgcaaagactgtccttgcaactagagaaagctgtggggtctgct
agtatagtagtttctagttctagtagtgattcagatgattcagacgattcagataattca
gatgactcagatgattcagatgcacagattaatgttacaatgagctccaagcgaagaccc
aaaaagaagattcgtaggatacttgatgatgctgaattaggagaagagacaaaaaggaaa
atagcaatcgaaaaggaacgtcaggaacgcctgaagtctttgagaggacagttttctgct
tcgtcaattgagatgagccccgatggatgtaatgggaatttatcagaaggtgcaagtgtt
gaagttcttggtgatgctctagcaggttacatagtgaatgttgtgagggagaaaggtgaa
gaagctgttagaattcctcctagcatttcagctaaactgaaggcgcatcagatatctgga
ataagatttatgtgggaaaatattatacagtcaatcagaaaagtgaagtctggggataaa
ggtcttggatgtattttagctcataccatgggccttggtaaaacatttcaggttatagct
tttttgtacactgcaatgagatgtgttgatctggggttaagaactgcacttatagtcaca
cctgtcaacgtgctacataattggcggcaagagttccttaagtggagtccttctgagtta
aagccactcaaagtcttcatgctggaagacgtaccaagggatagaagggcggaattgctt
aaaaaatggagagctaaaggtggtgtctttttgattggttatactgctttccgaaacttg
tcttttgggaagcatgtgaaagatcggaacatggccagagaaatttgccatgctttgcag
gatggtcctgacattcttgtttgtgatgaagcccatatgataaaaaatactaaggctgat
gtaacacaagccttgaaacaagtaaaatgccagagaagaattgcacttactgggtcaccc
cttcaaaacaatctcatggagtattactgtatggttgattttgtaagagaaggttttctt
ggaagcagccatgaatttcggaaccgcttccaaaatcctatagagaatggacaacacacc
aattcaacattgacagatgtgaaaattatgaaccagaggtctcatatcctatatgaagag
ttaaaaggctttgttcaaagaatggacatgaatgtggtgaagaaggatctaccacccaaa
actgtctttgtgataactgtcaagctttctcccttgcagagaaaattgtacaagagattc
cttgatgtgcatgggttcactacccaggagcatcctgaaatgttaaggaagagatgtttt
tttgctgggtaccaggcattggcacggatatggaaccaccctgggatcttgcagttgaca
aaagaagccaaggattatgcaaaagaagaggatgctgttgagaattttcttgtggatgat
agttcaagtgacgaaaattctgattataatgttcttgctggagagaagatggggtttgca
aatgacttactgcaaagaaaagatggtaatggctttttcctgaagggttggtggaatgac
cttcttcatggaaaaatatataaagagatcgatcacagcggcaaaatggttttgctgatg
gagatactaactatgagttctgatgtgggtgataaggtattagtttttagtcagagcata
ccaaccctagacctcattgaactttatctctcaaggacacctcgacgtggaaaacgagga
aagttttggaagaaggggaaagattggtataggttggatgggaggacagtgagttctgag
aggcagaagcttgttgagagatttaatgagcctttgaataagagggtaaagtgcactcta
atttcaacaagagctggctctttgggtataaatcttcatgcagctaatcgtgttgttata
gttgatggttcttggaatccaacatatgatctccaggctatctatcgatcatggaggtat
ggacagacaaagcctgtatttgcttatcgattgctagctcatggaactatggaagagaag
atatacaagcgccaggtcacaaaggaggggcttgctgctagggtggttgataggcagcag
gtgcataggaccatatctaaagaagaaatgctgcatctctttgcgtttggtgatgatgac
aaccctgagactttaggcgatctaggtcaagaaaatgagcaccaagaaaacccaatttcg
gttgggcatcctctgaaacacacagcaccacattcaaatggaagtagttattctgataag
ttgatggaaagcttacttagcaagcatcatccgtggtggattgcccattatcatgaacat
gaatccctgttgcaagaaaatgaagatgaaaaactatccaaagaggagcaagatatggct
tgggaggtttaccggaaatccctggaatgggaagaagtccagagagtaccactaggtgaa
tctattgtgcctattcagaaaccagaaattccaaatgatgtgcctcatgtatcagaaact
tgtaacatcttgccgagtaaactaagccgacgtttcgcgtcacggaaatgcacaaacctt
gcgcacatgttgacacttcgaagccagggaacaaaattcggttgcagtactgtctgtggg
gaatgtgcccaggagattaggtgggaagatttgaagaagagatag
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