Entry |
|
Name |
(RefSeq) small RNA degrading nuclease 5
|
KO |
K14570 | RNA exonuclease [EC:3.1.-.-] |
|
Organism |
vun Vigna unguiculata (cowpea)
|
Pathway |
vun03008 | Ribosome biogenesis in eukaryotes |
|
Brite |
KEGG Orthology (KO) [BR:vun00001]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114193099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:vun03009]
114193099
Ribosome biogenesis [BR:vun03009]
Eukaryotic type
Pre-60S particles
RNases
114193099
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
8:10777357..10786356
|
AA seq |
573 aa
MPQAVAAGRMTSSETFRSVEEDDSTANKKRDVFYDVYGPEGKADVVFKSPEDNSVLDLKD
IQGLVTWVLGEGFMPSWVFIKNKPLIPKVVMLYMPGLDAALFLSLSKMLHNLKKICGKPR
PVLALSCVSDSMQTIDALLTCKMKRKRDENRPALTSHQEEGCHDTDSLTFKELTKDIPFP
VTYYTLTEKELEENGYSFNQPGFLSTLPAPPGSSFYEMLALDCEMCITNEGFELTRITLV
DIKGKVLIDRLVKPSNAIIDYNTRFSGITPEMLDGVTTSLRDIQQLFLKFVYEETILVGH
SLENDLLALKISHDLIIDTAVLYRHPRGTSHKKALRFLAKKFLAREIQQSANGHDSIEDA
RATLELALLKIKNGPDFGSPPSFTRKKFLSILSESGKTSSLIDDISIVKRYASESSNAIP
VISDDEALAKTKKEVKNDKVHFIWTQFSELHSYLKKQAEDSDSLNERLAEMMALQTCQNN
SAKQKGFKLKAPAELKEIMARMDARIYNLYSSLPTNAMMIIFTGHGDTAIVRRLRRMLAE
QNESNLCREKIVEILAEFQAHAEVALCFVGVKH |
NT seq |
1722 nt +upstreamnt +downstreamnt
atgccccaagcagtagccgctgggagaatgacttcctctgaaacctttcgaagtgttgaa
gaagatgattctactgctaacaaaaaacgcgacgtgttctacgatgtttatggacccgaa
ggtaaggcagatgttgttttcaagtcaccagaagataattcagttcttgatctaaaggat
attcaaggacttgtaacttgggtgcttggtgaaggatttatgccgtcatgggtttttatc
aagaataaacctcttattcccaaagtggttatgctctatatgccaggcctagatgcagcc
ttgtttttgtcgctgtctaaaatgcttcataatttaaagaaaatctgtggtaaaccaagg
cctgtcctggctcttagctgtgtgtcagatagtatgcagacgatagatgcactcctaaca
tgcaagatgaaaagaaaaagggatgagaatagacctgctctgacatcacatcaagaagaa
ggttgtcatgatacagacagtctaacatttaaagagcttacgaaagacatacctttccct
gttacgtactatacactaactgagaaagagctggaagagaatggatattctttcaatcaa
ccaggttttctttctactttgcctgcacctccaggatcttctttttatgagatgttggca
cttgattgtgagatgtgcataacaaatgaaggttttgagctgacaagaattactctagtg
gacatcaaaggaaaggttttgatagatagattggttaaaccctcaaatgctatcattgac
tacaacacaagatttagtggaataacgcctgagatgttagatggggtgacaacaagtctg
agagacattcagcaactgttcctaaagtttgtttacgaggagactatccttgttgggcat
tctctggaaaatgatttattagcattgaagatatcccatgacttgatcatagacacggca
gtgttgtacagacacccccgaggaacatctcataaaaaagctctacggtttcttgctaag
aaatttcttgcaagggagatacaacaatcagcgaatggacatgacagcattgaagatgct
agagctaccctggaattggcactattgaagataaaaaatgggcctgactttggttcccct
ccatcctttacaaggaaaaagttcctttctattctgagtgaatctggcaaaacttcgtca
ttgattgatgatatatccatagtaaaacggtatgcctctgagtcctctaatgcaattcca
gtgatctctgatgatgaagcacttgcaaagaccaagaaggaggtgaagaatgacaaggta
cattttatctggacacagttttcggagctacactcgtacctgaagaagcaagctgaagat
tctgatagtttgaatgaaagacttgccgagatgatggcattgcaaacgtgtcagaacaat
tctgctaaacagaaaggcttcaagttgaaagcacctgctgaactgaaggaaattatggct
cgcatggatgctagaatttataatctctactcgtcattacccacaaatgctatgatgata
atttttactggtcacggagacactgctattgtccgcaggttgaggagaatgcttgcagag
cagaatgaaagtaatttatgtcgagaaaagatcgtggaaattttggcagaatttcaggcc
cacgcagaagtagcattgtgttttgtaggcgtaaagcattga |