Vigna unguiculata (cowpea): 114193122
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Entry
114193122 CDS
T06017
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein MLH1
KO
K08734
DNA mismatch repair protein MLH1
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03430
Mismatch repair
vun03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
114193122
03460 Fanconi anemia pathway
114193122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vun03400
]
114193122
DNA repair and recombination proteins [BR:
vun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
114193122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
DUF6669
Motif
Other DBs
NCBI-GeneID:
114193122
NCBI-ProteinID:
XP_027938627
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Position
1:complement(272743..290630)
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AA seq
731 aa
AA seq
DB search
MEDTEIESEPLSRMEPPKIQRLSDSVVNRIAAGEVIQRPVNAVKELLENSLDACASSVNL
LIKDGGLKLIQVSDDGHGIRFEDLPILCERHTTSKLSAFEDLQRIKSMGFRGEALASMTY
VGHVTVTTITKDQLHGYRVSYRDGVMEHEPRPCAAVKGTQIMVENLFYNMAARRKTLQNS
SDDYSKIVDLVSRFAIHHVKVGFSCRKHGAVRADVHTVATSSRLDAIKSVYGVSVVRNLI
EIEASDDDPSSSVFEMHGYMSNANYAAKKITMVLFINDRLVECSALKRAIEIVYAATLPK
ASKPFIYISIVLPPENVDVNVHPTKREVSLLNQEVIIEKIQSVVESTLRSSNEARTFQEQ
TTVQSPLPRINISKEVDLSPMPTGSRSLKVPVNKMVRTDSLDPAGRLHAYTQITSDRNLG
MSASLNAVRSSIRQRRNPKDSLELTSVQELLDEINSNCDPGMMDIVRHCTYVGMADDVFA
LLQHNTCLYLANVVKLSKELMYQQVLSRFGHFNAIQLNDQVPLKDLIILALKEEDVDSNS
NDDDTLKDKIAEMNTELLKQKAEMLEEYFGIHIDELGNISRLPVIXDQYTPDMDRVPEFA
LCLGNDVDWEDEKSCIQTISAALGNFYAMHPPMLPNPSGEGFLLYKXRKMTDDYVEENTH
DNIGSDVIDNKVEHELLSEAETAWAQREWSIQHVLFPSMRLFFKPPVSMATDGTFVQVTS
LEKLYKIFERC
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggaagacactgagattgagagcgaacccttgtcccgcatggagcctcccaaaatccag
cgcctgagtgactccgtcgtcaaccgaatcgctgccggcgaggtcattcagcgtcctgtc
aacgccgtcaaggagctcctcgagaacagcctcgacgcctgcgcctcctccgtcaatctc
ctcatcaaggatggcggcctcaagctcattcaagtctccgacgacggccacggaatccga
tttgaggacttgccgattctgtgcgagcgccacacgacgtccaagctctccgcgtttgag
gacttgcagcgcatcaagtcgatgggattccgcggcgaggctctcgccagcatgacctat
gtcggtcacgtcaccgtcaccaccattaccaaagaccagttgcacggttacagggtgtca
tacagagatggtgtcatggagcacgaacccaggccatgtgctgctgttaaaggaacacag
ataatggttgagaatctgttctataacatggctgcaaggaggaagacactgcagaattct
tctgatgattattcaaagattgtagacttggtaagccggtttgctattcatcatgtgaaa
gtcggtttctcttgcagaaagcatggagctgttagagctgatgttcacactgttgccacg
tcttcaaggctcgatgccatcaaatctgtttatggggtctcagttgttcgcaatctaatt
gaaattgaagcttcagatgatgatccgtcttcttcggtttttgagatgcatggctacatg
tccaatgcgaattatgctgcaaagaaaatcacaatggtgcttttcattaacgatagactg
gttgagtgctctgcattgaagagagctattgaaattgtttatgcagcgacattaccaaaa
gcttctaagcccttcatatatatctcaattgttttaccaccagaaaatgttgatgtcaat
gtacatcctacaaagagagaggtgagccttttaaatcaggaagtcatcattgagaagata
cagtcagtggttgaatcaacactgaggagttccaatgaggcacgaacttttcaagaacaa
actactgtgcaatctccactgcctcgtattaatataagtaaagaggttgacctcagccct
atgccaacaggttcaagatcattgaaagtgcctgtaaataagatggttagaacagattca
ttagatcctgctggaagattacatgcctacacacaaattacgtctgatagaaatcttgga
atgagtgctagtttgaatgctgtgaggtcttccattagacaaagaaggaacccgaaagat
tctttagaactgacaagtgttcaagaacttctggatgagataaatagcaactgtgaccct
ggcatgatggacattgtaaggcattgcacatatgttggaatggcagatgatgttttcgct
ttgcttcaacataatacctgtctctatcttgcaaatgttgtgaagttgagcaaagaactc
atgtatcagcaagttctcagccgttttggccatttcaatgccattcaactgaatgatcaa
gttcctttgaaagacttgattatattggcactgaaggaagaggatgtagattcgaattct
aatgatgatgacacattaaaagacaagattgcagaaatgaacacagaactgctgaaacaa
aaggctgaaatgctggaggaatattttggcattcatattgatgaacttggaaatatctct
agacttcctgtgattnctgatcaatacactccggacatggatcgggtcccagagtttgca
ctttgtttgggcaatgatgttgactgggaagatgaaaagagttgcattcaaacgatttcg
gctgctttgggaaacttctatgctatgcatccaccaatgttgcccaatccatctggtgaa
ggttttcttttgtacaagnagagaaaaatgacggatgactatgttgaagagaatacccat
gataatattgggagtgacgtgattgacaataaagttgaacatgaactactttctgaagct
gagactgcatgggcccagcgcgaatggtcaatacaacatgtgctttttccttccatgaga
ctctttttcaaaccacctgtttctatggctactgatgggacctttgtacaggtaacttcg
ctggagaaactgtataagatttttgaaagatgctag
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