Vigna unguiculata (cowpea): 114193179 Help Entry 114193179         CDS       T06017                                  Name (RefSeq) protein PAT1 homolog isoform X1   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism vun  Vigna unguiculata (cowpea) Pathway vun03018   RNA degradation Brite KEGG Orthology (KO) [BR:vun00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     114193179  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vun03019]     114193179 Messenger RNA biogenesis [BR:vun03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      114193179   mRNA degradation factors    5'-3' decay     Decapping complex      114193179 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  114193179 NCBI-ProteinID:  XP_027938697 LinkDB All DBs Position 1:12392714..12400634 Genome browser AA seq 829 aa AA seqDB search MVDMDGFGTGGDVGGVPNTEDLRQLGNVSTEGAVFDASQYAFFGSDSAVQEVELGGLEDD DDLLESNGEFIVNREEAEDLKSLSDIDDLSTTFWKLNKVVSGPKSTEYIGEQGSRQNSAA EWAQKDDVLNWYEQNAYDNEGSLDGRRMSSQPHSSLSQLHEPKALYRTSSYPEQPRQQQH HQLQPGETAPNWFDQHMYGSETTHDGKRWSSQPHSTIAHLQETRPLHRTPLYPDKQQEFP HFSSEPILVPNSSFTSYPPPSGRSQQASPSHNTGHLNIPYHAMGAQMALSPQNRTHFSNP ALQMSGTNHGPPFGGNMRQFPSGSPLNQIMQNQLVSQAGLYPGDHPNISSGLPMINKYDQ MLGLMELRDQMPKSAQIGRPNLRFTPQGFDTSGHRSNSGWPRFRSKYMTTDEIENILRMQ LAATHSNDPYVDDYYHQGCLAKKSSGAKLRHHFSPAQIRELPLRPSSNTEPHAFLQVDAL GRVPFSSIRRPRPLLEVDPPNSSNVGSPEQSISEKPLEQEPMLAARVTIEDGIYLLLDVD DIDRFLQFNQLQDGGLQLKRKRQGLLEGLATSLQLVDPLGKNGRTVTLAAKDDFVFLRIV SLPKGRKLLARYLQLLFPGGDLMRVACMAIFRHLRFLFGNLPSDPASADTINNLAKVVSR CIREMDLSAISACLAAAVCTSDPPPLRPLGSSAGDGASLILVSVLERATELLTDPHAASN YNIANRSLWQATFDEFFVLLTKYCVSKYDGVMQSFLIQGTPNMAAIGADAAKAISKEMPV ELLRASLPHTDDHQKKLLLDFAQRSIPVVGFNGNSGGHGHHVNSESVLS NT seq 2490 nt NT seq  +upstreamnt  +downstreamnt atggtggatatggatgggtttggaactgggggtgatgttgggggagttcccaacacagag gatcttaggcaactggggaatgtttccacagaaggtgctgtttttgatgcatcgcaatat gcattttttggttcggatagtgctgttcaagaagttgagctgggagggttagaagatgat gacgatttgcttgagtctaatggggagttcattgtcaacagagaagaggctgaggattta aaatctctctctgatattgatgatctcagtactacattttggaagttgaacaaggttgta agtggaccaaaaagcacagaatatattggtgaacagggatcaaggcaaaattctgcagct gaatgggcacaaaaggacgatgttcttaactggtatgaacagaatgcttatgataatgag ggttctctggatggaagaagaatgtcatcgcaacctcattcttctctttctcagttacat gaaccaaaggccttgtacaggacatcctcatatcctgagcagcctaggcagcaacaacat caccagctccaacctggtgaaacggctcccaactggtttgatcagcatatgtatggttct gagactactcacgatggaaaacggtggtcatcacaaccacattccacaattgctcactta caagaaacaaggccattgcatagaacacctttatatcctgacaagcagcaggaatttcct cacttttctagtgagccaattttggtaccgaactcttcatttacttcttatcctccaccc agtggtagatctcagcaagcttctccaagtcataatacagggcatttaaacattccttac catgctatgggagctcagatggcactgtcacctcaaaatcgtactcatttctccaatcct gcgttacagatgagtggaacaaatcatgggccacctttcggtggaaacatgcgccaattt cctagtggttcccctcttaatcagataatgcagaatcaattggtaagccaggcagggtta tatcctggagatcatcccaatatttcctcaggtttacccatgattaacaagtatgatcag atgctggggctgatggaactgagggatcaaatgccaaaatcagctcaaataggtaggccg aatctccggtttacccctcagggttttgatacaagtggccatagaagcaatagtggatgg cctagatttagatccaagtatatgactactgatgaaattgagaatattcttagaatgcaa cttgcagcaacacatagcaatgatccatatgttgatgattattatcaccaaggctgtctt gcaaaaaagtcttctggtgctaaattgaggcaccactttagtccagctcaaataagggaa cttcctctacgaccctcttctaatactgaaccacatgcttttcttcaggttgatgctcta gggagggttccattctcatcgattcgtaggccccgtcctctactggaagttgatcctcca aattcctctaatgtaggtagtcctgagcaaagcatttcagagaaaccccttgaacaggaa ccaatgcttgcagctagggttacaattgaagatggtatttatcttcttcttgatgtagat gatattgatcgtttcctacagtttaatcagctccaagatggcggtcttcagttaaaacgg aaacggcagggtcttttggaaggacttgctacctctcttcagttagttgatccactggga aagaatggacgtacagttacacttgctgcaaaagatgactttgtttttctaaggatagtt tctctacccaagggtagaaagcttcttgctaggtaccttcaactgctttttcctggtggt gatctaatgcgggtagcctgcatggctatctttcggcacttaaggtttttatttggtaat ctcccctctgatccagcttcagcagacactattaataaccttgcaaaggttgtttcaaga tgcatccgtgaaatggatcttagtgcaattagtgcttgtctagcagctgctgtttgtact tctgatccacctcccctacgtccccttggaagttcagctggagacggggcttcccttatt ctagtatccgtgcttgaaagggcaactgaacttctaactgatcctcatgctgctagcaat tataatattgcaaaccgttcactttggcaggctacatttgatgaattctttgtccttctg accaagtattgtgtgagtaaatatgatggtgtaatgcaatcattccttatacaagggaca ccaaatatggctgccattggtgcagatgctgctaaagctattagcaaggaaatgccagtt gagctcttacgtgcaagtttacctcacaccgatgatcaccagaaaaaattattacttgat tttgctcagcgctctatacctgttgttggatttaatggtaattctgggggccatggtcac catgtgaactcggagtcagtgctgagttaa

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