KEGG   Vigna unguiculata (cowpea): 114193454
Entry
114193454         CDS       T06017                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
vun  Vigna unguiculata (cowpea)
Pathway
vun03020  RNA polymerase
vun03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vun00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    114193454
  09124 Replication and repair
   03420 Nucleotide excision repair
    114193454
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vun03021]
    114193454
   03400 DNA repair and recombination proteins [BR:vun03400]
    114193454
Transcription machinery [BR:vun03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     114193454
DNA repair and recombination proteins [BR:vun03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      114193454
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 114193454
NCBI-ProteinID: XP_027939063
LinkDB
Position
8:complement(36822850..36826556)
AA seq 138 aa
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQ
YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQD
DEAIEKMLNDLSLIKKFE
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtctggggaagaggaagaaaacgccgcagagctcaaaattggagacgagtttttgaag
gcaaagtgcttaatgaactgtgaagtttcattgattcttgagcacaagtacgagcagctt
caacagacatctgatgatcccatgaatcaagtttctcaggtatttgaaaagtcgttgcag
tacgtgaagcgattcagccgctataaaaatccagatgctgttagacaagttcgagaaata
cttgcaagatatcaattggctgagtttgagttgtgtgtccttggcaacctttgcccggaa
actgtggaggaagctattgctatggttccatctatcaagacaagaggacgggctcaggat
gatgaagcaattgagaaaatgttgaatgacttgtcattgattaagaaatttgaataa

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