Vigna unguiculata (cowpea): 114193571
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Entry
114193571 CDS
T06017
Name
(RefSeq) uncharacterized protein At3g06530
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114193571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vun03009
]
114193571
Ribosome biogenesis [BR:
vun03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
114193571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_At3g06530
HEAT_HEATR1
BP28CT
U3snoRNP10
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
114193571
NCBI-ProteinID:
XP_027939226
LinkDB
All DBs
Position
8:36320120..36340935
Genome browser
AA seq
2144 aa
AA seq
DB search
MATSLASQLETLRSFAKADAEPLKRPFTRPSILFDPKEAADIDIETLFSIALEGLEVLIG
KDERFRNYKNDLFSHRSKELDRELLGIEQNNQLNVSIASYLRLLSGYFLLRPALKTIEYL
IRRHKIHVYNVEELILCSLPYHDTHPFVRIVQILDTRNTKWGFLDGVKASGAPPPRMVIV
QQCIRDKGILDALCNYASPSKKSQPSRLFIGFCTAVFVEVLGTVVTVDDDLVKRILPFVV
SGLQPGTNGVSDHKAGSLMIIGLLGNKAALAPKLLNGLIRSVAEVARGEAIEMTDIYWFR
LSLITLINLVQFQNVEILPTKALEVLNKIRDLAGVLLELSKEFNIEKFLRVLLDSLIDCS
SDEYCQQTLLSLVEIVPINSFVSHVVTTILSTCVKLSQKVGDSTSSMSAGWAKKILIIFN
TKYPSELRGAVHHFLQENKVRSKKDDSLYKVLCKLLDGNLDSALDISDSKVWFGLYHPKA
DVRRATLLDLDYSVIPETKAGSKNLINVQEAILRLLDDKELTVVQAALRVDGLPNVIDSS
KLLDALLNVLKRCMDKLLSGSADNDSLNGEVALTCLKKTISYFSDHSDYLKNVAAMIFPL
LIVLPQTQSLNLRALALVNKINWPLYKNVSMASSGEVASIAGSLSSINLNIVNKMAENFL
VHPEEHVIWFVECCSDLELSKTLFIFVLLQSLCIKPKDEDICALFECLFPILKAEWETQV
AADVVLDEFNSEMLEWECKDFFKDLLYANLRPINVKVMICIFWRLLELLLSVAPSDILLR
DGDKWVSKIRNLFVFFASSKLKHAFRKHLHHLAVQCRISPSCLLSKFFTEEGVSAAVQVE
SLQCYAYLCSLEPDNWKLGLLAEFPSVLVPLASDTQNIRVAAMDCIDSLYTLWCHFEHAG
KKNGNNASWFHFVGELLSLMSQLKTFILSDKKFLPSLFASALSSSFTNNLEHQNILVPQN
VEKRFDQPTKTRIIGFILGSTLKLSNYGKLMILSLFKGIGNALMNVPEVGSLLFTFLKQY
YEELGLSCPKLSDNEIQITSLLLESCAMSSPSGGNDLQDLLLKALRFGGLNSDDPACVKP
CITVLNKLNSKFYVELKNEVKEHLFCELVFLWHNGNGDVQRATKEALMRIDISFSTVGYM
LDHILAPKSFKVISSNKKAVKKKKLVGHQEAEDPSNSIWRRDNPFYILSSLLDVLLLKKD
ITNRHLLLGPLFKLLSKVFSEEWVNESFIPVQRLSQKSSPSEANNSTIYHIQQTLLIILE
DIIISLKSIASQNEKIKSEINIKLLIKCAQNSDVITRNHIFSVLSAITRVYPEEILEYML
DILVVIGEAAVTQIDDHSRIVFEDLISAIVPCWLSKTDDVEKLLKIFMEKFPEIVEHRRL
SFVLYLLRTLGEGKSLASLLILLFRSLISKKASCFLNAETADDLTFYTREWEYRFAVQIC
EQFTSKIWLPSLVMLLQQRVNRDVDQTQFLEMFIVMQFSLQKLQDPEFVFKLESREDAVV
IQKALGELMEQVVLFLQLVDARKKQLNIPVIMRKELKETMRAVIRNLTAVMIPYVYINSV
IKLLHNADKNVGKKALGLLCEAARSHKNVSLKLKDNKGSRSTSTSLLLHMNETSPESLNK
LCVEIIRVLDDSSDTSLKVAAISALEVVAEIFPSNNSIFSLCLQSVARYIASHNLAVTSS
CLRATAALINVLGPKALAELPKIMDNVMKSFRRVLSNLDMKPKNSDVLSASMESYFYLLI
TLEAVVDKLGGFLNPYLENIMEILVLYPELLSGMHAKVESRAHGVRKLFAERIPVRLALP
PFLKLYPAAIKAGDKSLTIVFDMLGIIIGTMDRSSIVAFHGKVFDFCLVALDLRRQSPPS
IQNIDLVEKGVLNTLTLLTLKLTESMFKPLLIKSIEWVESEVDGTSSTGSIDRAISFYGM
VNKLTENHRSLFVPYFKHLLGGCVHHLSGDVKVSTGNQKKRAKIVDDGNIKETGSVSIKV
WHLRALVLSSLHKCFLYDTGTLKFLDSSNFQMLLRPIVSQLVIDPPTLLDDSMNIPSVKD
VDDLVVSCIGQMAVTAGSDLLWKPLNHEVLMQTRSDKMRAKMLGLRIVKYFVQNLKEEYL
VLLAETIPFLGELLEDVEISVKSLAQDILQEMESLSGESLRQYL
NT seq
6435 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctccttagcctcgcaattagaaactctaaggtccttcgcgaaagccgacgcc
gagcctctaaagaggccgttcactcgtccttcaatattgttcgatcccaaagaagccgcc
gacatcgatatcgaaactcttttctccatcgctcttgaaggtttagaggttcttattggc
aaggatgagcggtttaggaattataaaaacgatttgtttagccacaggagtaaggagttg
gatagagagttgttgggaatagaacagaacaatcaacttaatgtctccattgcttcgtac
ttaagactgctttctggatattttcttcttcggcctgctcttaaaacgattgagtacttg
atacgtagacacaagattcatgtgtacaacgtcgaggaattgattttgtgttctttgccg
taccacgacacacatccatttgttcgaatagtacagatacttgatacaaggaatactaaa
tgggggtttcttgatggtgttaaagcgtctggtgcaccgccgcctaggatggtcatcgtg
cagcagtgcatccgtgataaaggcatattagatgctctatgcaactatgcatctccgtct
aaaaagtctcaaccttcaaggctttttattggtttttgtactgctgtttttgttgaggtt
ttgggtactgttgtaactgtagacgatgatcttgtaaagaggatacttccttttgtggta
tctggtcttcagcctggcactaatggggtttcagatcacaaggctggttctttgatgatc
attggtttgcttggaaacaaagcggcattagctcccaaacttttgaatggtttgatacgt
tcagttgctgaggttgctcgtggcgaggctatagagatgacagatatctattggtttcga
ttgtcccttattaccttaatcaatcttgttcagtttcaaaatgttgaaatactcccaacg
aaggccttggaggttttaaataaaataagggacctggcaggggttttattagaattatct
aaggagttcaatattgaaaagtttcttcgtgtgcttttggactccctgattgactgcagt
tctgatgaatactgtcagcagactttgctatccttggtagaaattgtccccataaacagt
tttgtttctcatgtggtcacaacgattctttcaacttgtgtgaaattatcacaaaaagtt
ggtgactcgacttcttccatgtcagctggctgggcgaagaagattctgattattttcaac
acaaagtacccttctgaactacgtggtgcagttcatcatttccttcaggaaaacaaagtt
cgttccaagaaagatgattcattgtataaggttttgtgtaagttgttagatggaaatttg
gattctgcacttgatatctcagactcaaaagtttggtttggcctgtatcatccgaaggct
gatgttcgtcgtgctacactgcttgatttagattattctgttatcccggaaaccaaggct
ggttcaaagaatcttataaacgttcaagaggccatattaagactgctagatgataaagaa
ttaacagttgttcaagcagctttacgtgttgatggcttgccaaatgtaatagattcttct
aagcttcttgatgcactactgaatgtgctaaaaagatgcatggacaaactgctttcaggt
tctgctgataacgacagtctaaatggtgaagttgctctcacttgtttaaagaagactatc
tcttacttcagtgatcattctgattacttgaaaaacgttgctgctatgatttttccatta
ctcattgttctaccccagacacagagcttgaatttaagggctttggcactagtcaacaaa
atcaactggccactttataagaatgtttccatggcttcgtctggagaagtggcatcgata
gctggaagtttatcttcaattaacttgaatattgtcaataaaatggctgaaaatttcttg
gtccatcctgaagagcatgttatatggtttgtggaatgctgcagtgatttagagttgtca
aagacactcttcatttttgttctcttgcagtctctttgtataaaaccaaaagatgaagac
atttgtgcactatttgaatgtctatttcctatactaaaggctgagtgggaaactcaagta
gctgctgatgtcgtattggatgagttcaattctgaaatgctagagtgggagtgcaaggat
ttctttaaagatcttttgtatgccaatctaaggcctattaacgtgaaggttatgatttgc
atattttggaggctgttagaactactactatctgtagcaccttctgacattctgctgcgt
gatggtgataagtgggtcagcaagataaggaatttgtttgttttttttgcctcctcaaaa
ttgaagcatgcatttcgtaaacacctccatcacttagcagtgcagtgcagaatatctcct
tcttgtctcttgtccaagtttttcacagaggaaggtgtttctgctgcagtccaggttgaa
agtcttcaatgctatgcatatctttgtagcctggaaccagataattggaaacttggactt
ttagctgaattcccttctgttcttgttcctttagcgagtgatactcagaatataagggtt
gctgccatggactgtattgattcattgtacacattgtggtgtcattttgagcatgctggc
aagaaaaatgggaacaatgcctcatggttccatttcgtgggcgagcttctctccctgatg
agtcagctgaaaacattcatattatccgacaagaaatttcttccttcactatttgcatcc
gctttgagctcatcctttacaaacaacttggaacatcaaaacattttggtacctcaaaat
gttgaaaaaaggtttgatcagcctacgaaaacaagaatcataggcttcattttgggttcc
acgctgaaactctctaactatggaaagctaatgattttatccttgttcaaaggaattggg
aatgcccttatgaatgttccagaagttggttctttgttgttcacttttcttaagcaatac
tatgaagagctcggtctgtcttgtccaaaattgtcagacaatgaaattcagataacgagc
cttttgctggagagctgtgctatgtcatctccctctggtggaaatgatctacaagatctt
ttactgaaagcattgcggtttgggggcctgaattcggatgaccctgcctgtgtaaagcct
tgtatcactgttttgaacaaactcaacagtaaattctatgtggagttgaagaatgaagtg
aaggagcatttgttttgtgagcttgtgtttctgtggcataatggtaatggtgatgtacaa
cgtgcaactaaagaggcattaatgcgtatagatattagtttctcaactgttggctacatg
cttgaccacatacttgcaccgaagagttttaaagttatttcttcaaataaaaaggctgtg
aagaaaaaaaaattggttggacatcaagaagctgaagatccttctaatagcatatggaga
agagataatccattctatatccttagttcccttcttgatgttttgctattgaagaaggac
ataacaaataggcatttactgttaggacccttattcaagcttcttagcaaggtattttca
gaggaatgggtgaatgagtcctttatccctgtgcaaaggttaagccaaaaatcaagtcct
tccgaagccaacaatagcacaatatatcatattcaacagactctattgataatcctggag
gatataattatttctcttaaaagcattgcctcacagaatgaaaagattaaaagtgaaatt
aacattaagctactgataaagtgtgcccagaactccgatgttatcacccgcaaccatata
ttttctgttctttctgctattactagagtttatccagaagaaattttggagtatatgctc
gatattcttgtagttattggagaagcagccgtcacacagattgatgaccattcaaggatt
gtttttgaggatcttatatctgcaattgttccttgttggctttctaagacagatgatgtg
gagaaactactgaagattttcatggaaaaatttcctgaaattgttgaacacagaaggcta
tcatttgtgttatatttgttaagaactttaggtgaggggaaaagcttagcgtcgttgctt
atcctacttttccgttcgttaatttcaaagaaagccagttgttttcttaatgccgagaca
gcggatgatttaacattttatactagggagtgggaatatagatttgcagtgcaaatttgt
gaacaatttacgagtaagatttggcttccttctctggtcatgctacttcaacagagggta
aatagagatgttgaccagacacagttcctggaaatgtttattgtgatgcaattttctttg
caaaagttgcaagatccagagtttgtgtttaagttggaatcaagagaagatgccgttgtc
attcagaaggcattgggtgagctcatggagcaggttgttttatttttgcaacttgtagat
gcaagaaaaaagcaactgaacatccctgtaattatgaggaaggagttgaaggaaactatg
cgtgctgttataaggaatctaacagcagtcatgataccttacgtgtacattaacagcgta
attaaattgctccacaatgcagataaaaatgtcgggaagaaggctcttggactgttatgt
gaagctgcaagaagtcataaaaatgtgagcttaaagcttaaagacaataagggttctaga
tcaacttcaacttctcttttgcttcatatgaacgaaacttctccagaatcacttaataaa
ttatgtgttgaaattattcgagtacttgatgattcatcggatacctccttgaaagtggca
gcaatttctgctttagaagttgtagctgaaatatttccttcgaataattccatttttagt
ctgtgccttcaatctgttgcaagatatattgcatctcataacttggctgtgacttctagc
tgcctcagagcaactgctgccctgataaatgttctaggtccaaaggcactggcagaactt
cccaagattatggacaatgtgatgaagtcatttcgtcgagtattgtctaatttggatatg
aaacccaaaaacagtgatgttttatcagcctcaatggaatcctatttttatctcctcata
actttggaggcagttgtggacaagcttggtggatttttaaatccgtaccttgaaaatatc
atggagattctggtgctttatcctgaacttctttcaggaatgcatgcaaaggtggaatct
agagctcatggagtacgaaagctttttgctgaaagaattcctgttcgacttgcactgcca
cctttcttaaaattatacccggctgccattaaggctggggataaaagcttaacaattgtc
tttgatatgttgggaatcataattggtacaatggacagatcgtccattgtggcatttcat
gggaaggtatttgacttttgtttggttgctcttgatcttcgccggcaaagtcctccttca
attcaaaacattgatttagttgagaaaggtgtgcttaatacattgactcttctgacccta
aaacttacggagagcatgttcaagcctcttctcataaagagtatagagtgggtagaatct
gaagtggatggaacttcaagtacaggaagcatagatagggccatatctttctatggcatg
gtaaataagcttacagagaaccatcggtcattgtttgttccttacttcaaacacttgctt
ggtggatgtgttcatcatcttagtggtgatgtgaaagtgtctactgggaatcagaagaaa
agggccaagattgtggatgatggcaatataaaagaaacaggcagcgtctccatcaaggtt
tggcatctcagggcactagtcttgtcatctttacacaagtgtttcctgtatgacactggg
accttgaagtttctggactcctcaaatttccagatgttgttgagacctattgtttcacaa
cttgttatagatccaccgactttgttggatgacagcatgaatataccaagtgtgaaggac
gttgatgacctagtggtttcgtgcatcggtcaaatggcagtgactgctggatctgacctt
ttgtggaagcctttgaaccatgaggttttaatgcagacacggagtgataagatgcgagct
aaaatgttgggcctaagaattgttaagtattttgtgcagaacttgaaagaagaataccta
gttttattggccgaaacgatccccttccttggtgaactacttgaggacgtggagatttca
gttaaatctcttgcgcaggatattctccaggaaatggagtctctgagtggggaaagcctt
cggcaatacctatga
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integrated database retrieval system
