Entry |
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Name |
(RefSeq) protein SMG7-like
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KO |
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Organism |
vun Vigna unguiculata (cowpea)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:vun00001]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114193987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:vun03019]
114193987
Messenger RNA biogenesis [BR:vun03019]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
114193987
mRNA cycle factors
Common to processing body (P body) and stress granule
114193987
|
SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
8:35380712..35387421
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AA seq |
920 aa
MDKVSVPSSWDRAHRLYEKNLELENKRRRSAQAQVPSDPNAWQQIRENYEAIILEDHAFS
EKHNIEYALWQLHYKRIEELRAYFNAAHTSVSSKSSPGGKGSVRPDRITKIRLQFKTFLS
EATGFYHDLIMNIRAKYGLPLGYFEDSENKIVMEKDEKKSSQMKKGLISCHRCLIYLGDL
ARYKGLYGGSDSKKREYAAASSYYLQAATIWPSSGNPYHQLALLASYNEDELTTVYCYFR
SLAVDSPFSTARDNLVLAFEKNRQSYSKLSGDVKAHAITGIGKGEAKLVTRDTGVETCST
KEGASNIRETYKSFCTCLVRLNGILFTRTSLETFAEVLSRVSAGLHELLSSGQDEELKFG
IDTLVNKLVIVRIVSMIIFTVHNVKKESEGQTYAEILQRAALLQNAFTAAFELMSLVVEK
CMQLQDPPSSYLLPGILVFVEWLACYPDIAAGKDEDNATTIRSKFWNHCLSFLNKLLSLL
PMSEDDGEETCFNNMSWYKEGETENRLALWEDFELRGFVPLLPAQTILDFSRKNSLGSDS
EKERKARIQRILAAGKALANVIRVDQKMIYFDSKGKKFVVGVQPQISDDFVISSLSDTPS
ADYHHYIEGEDDDEVIVFNPIVPEKQADMVVASSWAPHEGLKSVPTASVGDMKFNENSTS
NPLNDPNHQNSLPASVNAMVPQRLLPVQPHSLRWLEEEISLANSLKGLRFLENGHMMKPD
LPFKEVVPISDRPALAVPTQLSVRAGASMLYAHDLSKAGDFGNSFKVDANASAETLTDNS
VVRTPSTMQAGFKKSPISRPSRHLGPPPGFSHVPLKHGIEPTGPDSIGGNSIMDDYSWLD
GYQLPVSTKGLGPNGPLSYSQSNSHQVGNNGWHDHRTLELLKAHQNQQLQPQVLTNGNQH
LTPLPEQFQGQSIWTGQHFV |
NT seq |
2763 nt +upstreamnt +downstreamnt
atggataaagtgtctgttccttcatcatgggatcgtgcccatcgcctttatgagaagaac
cttgaattggagaataagcgaaggagatcagctcaggcacaggttccatcagatccaaat
gcttggcagcagatacgtgagaattatgaagcaataattctcgaggatcatgccttctcg
gagaagcataacattgagtatgctctatggcaattgcactataagcggattgaggaattg
agggcatactttaatgctgctcatacttctgtaagctcaaaatcatctcctggagggaaa
ggttctgttcgacctgaccggataactaaaataaggctgcaatttaagacttttctttca
gaagcaactggattttaccatgatcttattatgaatattagagctaagtatggacttcca
cttggttactttgaggactcagaaaataaaattgtaatggaaaaggatgaaaagaaatct
tctcagatgaagaaaggtttaatatcctgtcaccgttgtttgatatacttgggtgatctc
gctcgctacaaaggcttatatggtggaagcgactcaaaaaagcgtgaatatgcggcagct
tctagttactatctacaagctgcaactatttggccttcaagtggaaatccctatcatcag
cttgccttgttggcttcatataatgaggatgagctgactactgtttattgttattttcgg
agtttggctgtggatagtccattttcaactgccagggataatttggtacttgcatttgag
aagaatcgccaaagttactctaagctgtctggtgatgttaaagcacatgcaatcactgga
ataggaaaaggggaagcgaaacttgtgacccgggatacgggtgtggaaacctgttctaca
aaggagggagcatccaatatacgggaaacttacaaatctttctgcacatgccttgtccgt
cttaatggaatcttattcacgcgaacaagccttgagaccttcgctgaagttctatctcgt
gtaagtgctggcctgcatgaacttctatcatcaggacaagatgaagagctgaaatttggc
atagatactcttgtgaacaaactggtcattgtcagaattgtttccatgatcatatttaca
gttcataatgtgaaaaaggaatctgaaggtcaaacgtatgcagaaattctacagcgtgct
gctctacttcagaatgcattcactgcagctttcgaattgatgagtttagtagtagagaaa
tgtatgcagctgcaggatcctccttccagttatctcttaccaggcattttggtttttgtt
gagtggttggcatgttatccagatattgctgctggcaaggacgaagataatgcgacaact
attagatcaaaattttggaatcattgtctatccttcttgaacaagttgctttcacttttg
cctatgtcagaagatgatggagaggaaacttgctttaataacatgagctggtataaagaa
ggggaaacggaaaatcggcttgctttgtgggaggattttgagttaagaggatttgttcca
cttctacctgcacaaaccatcttggatttttcaaggaagaattcccttggaagtgacagt
gaaaaggaaagaaaagctcggattcaaaggattttagctgcaggaaaggctttagcaaac
gttattagagttgatcagaaaatgatatattttgactcaaagggaaagaaatttgttgtt
ggtgttcagcctcaaatctcagatgattttgttatttcctccctttcagacacacctagt
gcagactaccatcattatattgaaggagaggacgatgatgaggttattgttttcaatcct
atagtacctgagaaacaagctgatatggtggttgcctcatcatgggcaccccatgaaggc
ttaaaatcagttccaacagcttctgtaggggatatgaaatttaatgaaaattctacttct
aaccctctcaatgatccgaatcatcaaaattctttacctgcttctgtcaatgctatggtt
cctcaacgactactaccagttcaaccacattctttgaggtggttagaggaggaaatatct
cttgctaacagtttgaaaggtcttagatttttggagaatgggcacatgatgaaacctgac
ctaccatttaaagaagttgtgccaatctctgaccgtcctgcacttgcagttcctacccag
ctatctgtaagagctggtgctagtatgctttatgctcatgatctctcaaaagctggagac
tttggaaattcattcaaagttgatgccaatgcgtctgctgaaacacttactgacaactct
gttgtgagaacgccatccaccatgcaagctggttttaaaaaatctcctatcagtcgacct
tctaggcaccttggacctcctcctggattcagtcatgttcctcttaaacatggtattgaa
cccactggtccagattcaattggtggaaattcaattatggatgattacagttggttggat
ggatatcagttgcctgtgtcaaccaaaggtttaggtccaaatggtcctctcagttactct
cagtcaaattcccatcaagttggtaacaatggctggcatgatcatcggacacttgagctt
ttaaaagcacaccaaaatcagcagttgcagccacaggttctcacaaatggaaatcagcat
cttactcctctgcctgagcaattccaaggacaatcaatttggacaggtcaacacttcgtg
tga |