Vigna unguiculata (cowpea): 114194160
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Entry
114194160 CDS
T06017
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114194160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114194160
03036 Chromosome and associated proteins [BR:
vun03036
]
114194160
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114194160
Chromosome and associated proteins [BR:
vun03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
114194160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
114194160
NCBI-ProteinID:
XP_027940048
LinkDB
All DBs
Position
8:37814430..37820751
Genome browser
AA seq
1023 aa
AA seq
DB search
MECDVGGISDSFVLLHTCKRRRVYKGCIAPSVDIMTEAEAFLPVLNSSGYYTKPSLKELV
ARELVEPGYCGRVSDFTVGRFGYGYVRYLNETDVRGLHIDEIVNFRRHEIVVYSDENDKP
AVGQGLNKAAEVVLVLDSEILKSMKGKEDVIVKKLKQITERQEAQFISFDLVTGEWKFLV
EHFSRFGFGDDDEEDIVMDDAEVYDVGKESPSNTNEVELSHSLPSHLRLDPVKMREMRLL
MFPDDEEVEDLSHKSSSDKQYVRPLQSSAHVINHRFTPPVPRKTPFPLLEYKHGNFDSNS
PGGILMVQQHKAVPLRTVKSQGFNLDLKHETPVSGNCAHNIVDAGLFMGKSFRVGWGPNG
ILVHSGAPVGSSGDHRLLSSVINLEKVAFDNVVRDENKKVSEELIEHALVSPLKFHKGIN
HVMKEVEIGPCRLKLQKLEANRTILSEISHQYCDLIERQLSVPGLSSSTRLGLTHQVMTW
ELIRVLFSDREEKGQVESLGADNEEDMMQDIKEISQDVDQEALPLIRRAEFSYWLRESVS
YHVQNQISSLNDSDYLQHIFVLLTGRQLDEAVQLAVSKGDVRLACLLSQAGGSTVNRADI
ARQLDIWRNKGLDFSFIEEDRLRLYELLAGNIHDALHDVKIDWRRFLGLLMWYKLPPNSS
LPIAFKTYKHFLDEGTAPYPVPLFIDEGTLEEVIGWNSDKHFDISFYLMLLHANEETKFS
FLKAMFSAFSSSPDPLDYNMIWHQRAVLEAVGVISSNDLHILDMSFVSQLLCLGKCHWAI
YVVLHLPLREDYPYLHVNLIREILFQYCETWSSDESQQQFIEDLGIPTDWMHEALATYYN
YNQDHSKALEQFLQCAYWQKAHTIFITSVAHRLFLQSKHAEIWSIATSMEDHKSETENWE
LGAGIYISFYLMRNSLQGDPNSMTELDSLESKNAACQDFVSQLNESLAVWGGRLPVDARV
VYSRMASEICDLLLASVGEGATRDEQFNCFDTAFSAPIPEDQRSGHLQDAVYLFTSYLLE
ISN
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggaatgtgacgttggaggcatctctgattcattcgtgctgctgcatacttgtaagagg
agaagggtttataaaggctgcattgctccgtccgttgatatcatgacagaagctgaagct
tttttgcctgtattgaactcaagcggttattataccaaaccatctctgaaggaattagtg
gccagggagcttgttgaacctggttattgcggccgtgtttctgatttcactgttggaaga
tttggttatggatatgtcaggtatcttaacgaaactgatgtgagggggttacatatagat
gaaattgtcaactttcgcaggcatgagatagttgtatatagtgatgaaaatgataagcct
gcggttggtcagggccttaacaaagcagctgaagtagttttggtattagacagtgaaata
ttgaagtctatgaagggcaaggaagatgttatagtgaaaaaattaaaacaaattacagag
agacaggaagcgcaatttatttcctttgatctagtgactggtgagtggaaattcttagtt
gaacacttcagcagatttgggtttggagatgatgatgaggaagacatcgtcatggatgat
gctgaggtatatgatgttgggaaagaatcaccatcaaataccaatgaagttgagctttct
cattctctaccttctcatcttaggcttgatcctgttaagatgagagaaatgagattgttg
atgtttccagatgacgaagaggtagaagacttaagtcataaatcatcttctgacaagcag
tatgtacggccattacaaagttctgctcacgtcattaaccatcgtttcaccccaccagtt
ccaagaaaaactccatttccattacttgagtataaacatggtaattttgattcaaattct
cctggaggcattttgatggttcagcagcataaggccgtgcctcttaggacagttaaatca
caaggttttaatcttgatctcaaacatgaaactccagtatctggaaactgtgctcacaat
atagttgatgctggtctatttatgggtaagtcatttcgagttggttggggaccaaacggc
attcttgtacactctggtgcacctgtaggaagcagtggtgatcacagactgttatcgtct
gtcatcaatttggagaaagttgcttttgataatgtggtcagggatgaaaataaaaaagtg
agtgaggaacttatcgaacatgctttggtatctccattaaaatttcacaaaggaataaat
catgtgatgaaagaagttgaaattggtccctgcagattgaaacttcaaaagcttgaagct
aatcgtacgatcctgtctgagatttctcatcagtactgtgatcttattgagaggcaactg
agtgttcctgggttatcttcctctactcgtttgggtctgacacaccaagtaatgacctgg
gaattaattagagttcttttttctgatagagaagaaaaaggtcaagtagaatctttgggt
gctgacaatgaggaagatatgatgcaggatataaaggaaatttctcaagatgtcgaccaa
gaagcactccctctaataaggagggcagagtttagttattggttgcgagagagtgtttcc
tatcatgttcaaaatcaaataagctctctaaatgattctgattatctgcaacatattttt
gtactcctgactgggaggcaactggatgaggcagtacaactggctgtgtccaaaggagat
gtgagattggcttgtttattaagtcaggctggtggttctactgtgaatcgcgctgatata
gcaagacaacttgatatttggagaaataaagggctggattttagttttattgaagaggac
agattgagactctatgaattgctggcaggaaatattcatgatgcattgcatgatgttaaa
attgactggaggaggttcttaggtttattaatgtggtacaaattaccaccaaactcttca
ttacccattgcttttaagacttacaagcattttcttgatgagggaacagctccatatcct
gttcccctttttattgatgaaggaacattagaagaggttatcggttggaactcagataag
cactttgacatttcattttatctaatgcttcttcatgccaatgaagagacaaaattcagc
tttctgaaggctatgtttagtgcattctcttcctccccagatccacttgattataatatg
atttggcatcaacgtgcagtattggaagctgtgggtgttatcagttcgaacgatctccat
attctagacatgtcatttgtgtctcagctattgtgcttagggaaatgtcattgggccata
tatgtggtccttcacttgccccttcgtgaagattatccgtatcttcatgtaaatttgatt
cgagaaatattgttccaatactgtgaaacttggagttcagacgaatctcagcaacagttc
attgaggatttgggcattcccacggactggatgcacgaggcactggcaacttattataat
tacaatcaggatcactcgaaagcccttgagcaatttcttcagtgtgcatattggcagaaa
gctcatactatttttataacttcggttgctcatagattgttcttgcaatcaaaacatgct
gagatatggagtatagcaacttccatggaggaccataaatcagaaactgaaaactgggag
ttgggagctggaatttacatttcattttatttgatgagaaactcgcttcagggtgatccc
aattccatgaccgaattggattctcttgaaagtaaaaatgctgcttgtcaggattttgtc
agtcagctaaatgaatccctggctgtttggggtggcagactacctgttgacgcaagggtg
gtgtattcaagaatggcaagcgagatatgtgatttgctgctagcatctgttggtgagggt
gcaacccgtgatgagcaatttaactgctttgacactgctttcagtgctcccattccagaa
gatcaacgctccggtcacttgcaggatgcagtatatctttttaccagctacctcttagag
atatctaattaa
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