Vigna unguiculata (cowpea): 114194382
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Entry
114194382 CDS
T06017
Name
(RefSeq) THO complex subunit 5B isoform X1
KO
K13174
THO complex subunit 5
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114194382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114194382
03041 Spliceosome [BR:
vun03041
]
114194382
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
114194382
Spliceosome [BR:
vun03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
114194382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
FHIPEP
Motif
Other DBs
NCBI-GeneID:
114194382
NCBI-ProteinID:
XP_027940364
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All DBs
Position
8:complement(2145924..2154734)
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AA seq
501 aa
AA seq
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MEDGETTEEVVVVPVSNSDGVGDEQMFPHSPRQCDSEEESPHESLRKTKASIENAVAEII
ALKKHAEPKPLLTLRLRELLTQTFLHFVTLRQANRSILLEEEHARTETERAKAPLELTTQ
QLQNLMYEKSHYVKAIKACNDFKSKYPDIEVVSEGEFFRDAPQDMKDSVLCSHSEHNLVL
KRLNFELFQRKELCKLHDKLEQKKKTLLETIANRKKFLSSLPSHLKSLKKASLPVQNQLG
VQHTKKLKRHHSAELLPPPLYVIYSQLLAQKEAFGESIDVEIVGSVKDAQNFAHIQAHKD
TGISTTVESPKLENDEPDEDGQRRSKRPRRFQGKESLDQPGIFQVHPLTVNLHIYDDEVS
DLESAKLVTLNFEYMMQLNIICVGIKASNVGPENDILSNLFPDDTGLELPHQSAKLYVGD
AVMFNGDRTSRPYKWAQHLAGIDFLPEVAPLLLARRETPDGGEGAKGEDFLPSLSHYRQH
NRLQTVLQKIRSRIKARLVLQ
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggcgaaacgacggaggaggtggttgtcgttccggtttccaatagcgacggc
gtcggtgacgagcaaatgtttccgcattccccacgacaatgcgattcggaagaggagtct
ccgcacgaatcgttgcgtaaaacgaaagcttcaatagaaaacgccgtcgccgagattatc
gctctgaagaaacatgccgaacccaaaccgctcctcactctccgactcagagagctgctc
actcaaacgttcctccatttcgtcactcttcgccaggccaatcgctccatcttgttggag
gaggagcatgcgagaacggaaactgagcgtgcgaaggcgcctctggaactcaccacgcag
cagcttcagaacctgatgtacgagaagagtcactacgtgaaggcaataaaggcgtgtaac
gatttcaagtccaagtatcctgatattgaggtggtgtcggagggagagttttttcgtgac
gcaccgcaggacatgaaggactccgttttgtgtagccacagtgaacataatctcgtgctg
aagagactcaattttgagttgtttcagcgcaaagagctttgcaagcttcatgacaaactg
gagcagaaaaagaaaactcttttggagacaattgcaaaccgaaagaagttcttgtctagc
ctcccttcacatctcaagtctctaaagaaagcatccttgccagtgcaaaatcaactagga
gttcagcatactaagaaactaaagcggcatcactcagcagagttgcttccaccacctctt
tatgtgatttactcacaactgttggctcaaaaggaggcgtttggagaatctattgatgtg
gagattgtaggaagtgtcaaagatgctcaaaattttgcccacattcaagctcacaaggac
actggcatttccactacggtagagagtccgaaattggaaaatgatgaacctgatgaagat
ggtcagagacggagtaaaaggccaaggaggtttcaaggcaaggagagccttgaccaacca
ggaatatttcaagttcacccacttacagtcaatctccatatttatgatgacgaagtctct
gatttagagtctgctaaacttgttactctaaattttgagtacatgatgcagttgaatatt
atatgtgtcgggatcaaagcatctaatgttggtcctgagaatgacatcttaagcaatttg
tttcctgatgacacaggtctcgagcttcctcaccagtcagctaagctctatgttggggat
gctgtaatgtttaatggcgatagaacttcacgtccttacaaatgggctcagcacctggcc
ggtattgatttcttgcccgaggtggctccattgctgcttgctagacgtgaaactccagac
ggtggtgaaggagccaaaggcgaagatttcttacctagtctttcacattatcgccagcat
aaccgattgcagacagttctgcagaaaattcgctcaaggataaaagcacgtttggttctt
caataa
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