Vigna unguiculata (cowpea): 114194512
Help
Entry
114194512 CDS
T06017
Name
(RefSeq) cryptochrome-1-like isoform X1
KO
K12118
cryptochrome 1
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
114194512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
114194512
NCBI-ProteinID:
XP_027940586
LinkDB
All DBs
Position
8:24653729..24659326
Genome browser
AA seq
683 aa
AA seq
DB search
MSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVVAVFIWAPEEEGQYYPGRVSRWWLKQSL
AHLDSSLRSLGTPLITKRSTNSVSSLLEVVKSTGATQLFFNHLYDPLSLVRDHRTKEVLT
AQGITVRSFNSDLLYEPWDVNDAHGQPFTTFSAFWERCLSMPYDPQAPLLPPKRIIPGDA
SRCPCDTLVFEDDLEKASNALLSRAWSPGWSNADKALTAFINGPLIEYSKNRRKADSATT
SFLSPHLHFGEVSVKKVFHLVRIKQVFWANEGNKAGEESVNLFLKSIGLREYSRYISFNH
PYSHERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFEGYKCD
PNGEYVRRWLPELARLPTEWIHHPWNAPEYVLQAAGIELGSNYPLPIVGIDAAKVRLQEA
LIQMWQQEAASRAAIENGTEEGLGDSSESAPIAFPQDTHMEERPVEPVRNNPPHGTRRYE
DQMVPSMTSSHVRVEEEETSSDLRNSAADNRAEVPTNVTTEQNARETVNHGGLPNVNRNT
RVQNNATEMWLRNAAEDSTAESSSSTRRERDGGVVPVWSPPASNFSEQFVDDENGIGASS
SYLQRQHPQSHQLMNWTRLPQTG
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaggaggatgcagcatagtgtggtttaggagagatctgagggtagaggataat
cctgcacttgctgcaggagtgagagcaggagctgtggttgctgttttcatttgggctcca
gaagaagagggtcaatactaccctgggagggtctctaggtggtggctcaaacaaagtttg
gctcaccttgattcctctttgagaagccttggcactcccctaatcaccaagcgttccact
aatagtgtttcttctctattggaggttgttaagtccactggggctactcaactctttttc
aaccatttatatgatccattgtcacttgtgagggatcaccgaacaaaggaagttctgact
gcacagggcattaccgtacgttcattcaactcagacttattgtatgaaccatgggatgtg
aatgacgctcatggccaaccattcacaactttttctgctttttgggaaagatgcctcagc
atgccttatgacccacaagcacctcttctcccacctaaaagaattattccaggtgatgct
tcaaggtgcccttgtgatacattggtgtttgaagacgatttagagaaggcaagcaatgct
cttctttctcgagcatggtcaccggggtggagcaatgctgacaaggcattgacagcattc
ataaatggtcctctgattgaatactcaaagaatcgtaggaaggctgatagtgccacaacc
tcatttctctctccacatctgcactttggtgaggtgagtgtaaagaaagtgtttcatctt
gtccgcattaagcaagtgttttgggccaatgaaggaaacaaggctggtgaagagagtgtg
aacttgtttctcaagtctattggtcttagagagtattcgaggtacatcagtttcaaccac
ccctacagtcatgagaggccccttctgggccacctcaagtttttcccttgggtggtgaat
gaagggtacttcaaggcttggagacaaggcagaacagggtaccctttggtggatgctgga
atgagagagttgtgggcaactggttggttgcatgatcggatacgtgttgtggtttcaagt
ttctttgtgaaggtgctgcagcttccttggagatggggaatgaagtatttctgggatacc
cttttggatgcagatcttgagagtgatgctcttggttggcagtacatatctggtactctc
cctgatggtcgcgaatttgatcgaatagataatccacagtttgaggggtataaatgtgac
ccaaatggagaatatgttcgacgctggcttccagaacttgctagattaccaactgaatgg
atacaccatccgtggaatgcaccagagtatgtactacaagctgctggaattgaacttggt
tcaaattatcctcttcccattgtgggaatagatgctgcaaaagtcagactgcaggaagca
ctcatacaaatgtggcaacaagaagcagcttcaagagctgcaattgaaaatggaaccgag
gaaggtcttggagactcatctgaatcagcccctattgcttttcctcaagacacacacatg
gaagaaagacctgttgaacctgttaggaacaacccacctcatggtacacggcgctacgag
gatcagatggtcccaagtatgacttcttcccatgtgagagtggaagaggaagaaacttcc
tcagaccttcgaaactcagcagcagacaacagagccgaagttcctacaaatgtgaccaca
gagcaaaatgcaagagagacagtgaatcatggagggctgccgaatgtaaatagaaacact
cgagtacagaataatgctactgaaatgtggctgagaaatgcggctgaagattccacagca
gaatcgtcaagtagtactaggagagaaagggatgggggtgtggttccggtttggtctccc
ccagcatctaacttctcggaacaatttgtagatgatgaaaatggtattggagccagttca
tcatacttgcagaggcagcatcctcagtcccatcaattgatgaactggacgcggctacct
cagactgggtaa
DBGET
integrated database retrieval system
