Vigna unguiculata (cowpea): 114194583
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Entry
114194583 CDS
T06017
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vun03009
]
114194583
Enzymes [BR:
vun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114194583
Ribosome biogenesis [BR:
vun03009
]
Eukaryotic type
Pre-60S particles
Helicases
114194583
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Tox-REase-2
Motif
Other DBs
NCBI-GeneID:
114194583
NCBI-ProteinID:
XP_027940717
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All DBs
Position
1:complement(40292630..40297577)
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AA seq
587 aa
AA seq
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MDSDFPNKALTSTRFSDLNPPLSDSVLQALSQSGFDFCTPVQAATIPLLCSFKDVAVDAA
TGSGKTLAFVVPLVEILRRSCSHPKPHQVLGIIISPTRELSTQIYNVAQPFISTLVNVKS
ILLVGGAEVKADIKKIEEEGANILIGTPGRLHDIMNRMDVLDLKNLEILILDEADRLLDM
GFQKQITSIISILPKLRRTGLFSATQTEAIEELSKAGLRNPVRVEVRAETKSENDPASSK
QPESSKTPSGLHIEYLECEADKKPSQLIDILIKNRSRKIIIYFMTCACVDYWGAVLPSLS
VLKGFSLIPLHGKMKQSAREKALATFTSLSNGILLCTDVAARGLDIPGVDCIVQYDPPQD
PNVFVHRVGRTARLGKQGHAVVFLLPKEESYVEFLRIRRIPLQERICSDGALDIVPQIRS
AAKKDRDIMEKGIKAFVSYIRAYKEHHCSYIFRWKELEIGKLAMGYGLLQLPSMLEVKHH
SLSTDGFEPVEDINFADIKYRDKSREKQRKKNLQAKKEAKEKEPKPQKPKKTPDAVMRKK
TARQRRAQQTIEDEEELMQEYRLLKKLKKGTIDENEYAKLTGTEELL
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggattccgacttcccgaacaaagcgttgacgagcacgcgtttttccgacctgaatccg
ccactttccgactccgttctacaggccctatcacaatctggcttcgacttctgcacgccg
gtccaagccgccaccattcctttgctctgcagcttcaaagacgttgccgtcgatgccgcc
accggttccggtaaaaccctagcctttgtcgttcctctcgtcgagattctgcgccggtcc
tgctctcatcccaagcctcaccaggtgctagggataattatatctcctacaagggagctt
tcaacccaaatatataatgtggcacaaccattcatttcgacattggtgaatgttaagtcc
atactcctcgttggtggagcggaagtaaaagcagacataaagaaaatagaggaggaagga
gcaaacatattgatcggcacgcctgggcggttacatgacataatgaatcggatggatgtc
ttggatttgaaaaacttagagattttgattttggatgaggctgatagactcttagatatg
ggattccagaagcagataacttctattatatctatattgcctaagcttcgtcggactggt
ctattttctgctactcaaactgaggctattgaagagctttctaaggcgggactgagaaac
cctgtgagggttgaagttcgagcagaaactaaatcagaaaatgatcctgcgtcatcaaaa
cagccagagtcttcaaaaacaccttcaggacttcacattgagtacttggaatgcgaggca
gataagaagccatcacagctcatagatattcttattaaaaaccgctcaagaaaaattata
atatatttcatgacttgtgcttgtgttgattattggggagctgttcttcctagtctttct
gttttgaaaggtttctccttgattcctctacatggaaagatgaagcagtctgcaagggag
aaagcactggctacatttacatccctttcaaatggaattctgctatgtacggatgttgct
gcacgaggacttgacataccaggcgttgattgtatagtgcagtatgatccccctcaagat
ccaaatgtttttgtacatagagttggtcgaactgctcggctgggaaaacagggtcatgca
gttgtcttcttattaccaaaggaggaatcttatgtagaattcttgcgtataagaagaatt
cctctccaagagagaatatgttctgatggtgcattggatattgttcctcagattcgttct
gctgcaaaaaaagatcgcgatatcatggagaaaggaattaaggcttttgtctcttacatc
cgtgcttataaagagcatcactgctcttatatttttaggtggaaagaacttgaaattggc
aaattggccatgggatatggcttattacaacttccttcaatgctagaggtcaaacatcac
tccctttccactgacggatttgaaccagttgaagatatcaatttcgcagacattaagtac
agggataaatcacgggagaaacaaaggaagaagaacctacaagcaaagaaagaagccaaa
gagaaagagccaaaacctcaaaaaccaaagaaaaccccagatgctgtcatgcggaagaaa
acagctcgacagagacgtgctcaacagacaatagaagacgaggaggagttgatgcaagaa
taccgcttgttgaagaaattgaagaaagggaccatagacgagaatgaatatgccaagttg
acaggcactgaggaattactttga
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