Vigna unguiculata (cowpea): 114194703
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Entry
114194703 CDS
T06017
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114194703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vun03041
]
114194703
Spliceosome [BR:
vun03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
114194703
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
114194703
NCBI-ProteinID:
XP_027940874
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Position
8:complement(36564225..36571028)
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AA seq
569 aa
AA seq
DB search
MTSKREREVDRKVEDEGLDNESKRQKLDENSSPSPPPVSIANPLSGLANNYADIDEEEEY
VRRERGSVNESRNDRSQHNGHRYGEADGSDEEDDSQEQLFSGRNSRQVEVRKDCPYLDTV
NRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEK
VYCLPDGYEINDPSLDDIRHVLNPRFTGKEVEQLDKNKQWSRALDGSSYLPGMVGLNNIK
ETDFVNVTIQSLMRVTPLRNFFLIPENYQHCKSPLVHRFGELTRKIWHARNFKGQVSPHE
FLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLKTSKKNTSIIYECFQGELEVVKEI
PNKGTIDKKENNEDQNNAEKLLDGVNERYAFVKETSKMPFLMLGLDLPPPPLFKDVMEKN
IIPQVPLFNILKKFDGETITEVVRPHIARMKYRVTRLPKYMILHMRRFTKNNFFVEKNPT
LVNFPVKNLELKDYIPLPTPKENEKLRSKYDLIANVVHDGKPGEGLYRVFVQRKSEELWY
EMQDLHVSETLPHLVALSEAYMQIYEQQG
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaaaaagggaaagggaagttgatcgtaaagtagaggatgaagggcttgataat
gaatcgaaaaggcagaagctggatgagaattcctctccatctcctcctcccgtctccatt
gcgaatccactttctgggttagctaataattatgctgacattgatgaggaggaagaatat
gttcgaagggaaaggggttctgttaatgagagtaggaatgataggtcgcagcacaatggg
catagatatggagaggctgatggtagtgatgaagaagatgattcacaagaacaattattt
agtggaagaaacagtcgccaggttgaggttcggaaggactgtccttatctcgatacggtt
aatagacaggttttggattttgactttgaaaaattctgttctgtctccctatcgaattta
aatgtgtatgcatgtttggtttgcgggaagtattaccaagggagagggaagaagtctcat
gcatatacacatagtctggaagcaggacaccatgtttatatcaatctccgtactgaaaaa
gtctactgtcttcctgatggttatgaaattaatgatccttcattagatgacattcggcat
gtcttaaatccaagattcactggaaaagaagttgaacaacttgacaaaaataagcagtgg
tctagggcacttgatggttctagttaccttcctggaatggtgggacttaataatatcaag
gagactgattttgtgaatgtaacaattcaatccttaatgagagttacccccttgaggaat
tttttcctcatccctgaaaattatcaacactgtaaatctccacttgttcatcgatttggt
gaactcactaggaaaatatggcatgcacggaactttaaaggacaggtcagcccacatgag
tttctacaagcagtgatgaaagccagcaagaaaaggtttcggataggtgcacaatctgac
ccagttgagttcatgtcatggttgcttaatactctacatgcagatcttaagacatcaaaa
aagaataccagcataatctatgagtgttttcagggtgagcttgaggttgtgaaagagatt
cctaacaaaggtaccattgataagaaagaaaacaatgaagaccagaacaatgctgagaaa
cttttggatggggtaaatgagcgatatgcatttgtcaaagaaacttcaaaaatgccattt
ctaatgttggggttggacttgccaccacctcctcttttcaaggatgtgatggaaaaaaat
ataataccacaggttccactctttaacattctgaagaagtttgatggtgaaactatcaca
gaggtggtccgtcctcatatagcaaggatgaaatatcgtgttaccagattgcctaagtat
atgattcttcacatgcggaggtttactaagaataatttttttgtggaaaagaatcccaca
ttagtaaactttcctgtgaagaacctggagttgaaggattacattcccttgccaacacca
aaagaaaatgagaaattgcgatctaaatatgatttaattgctaatgttgttcatgatggc
aaacctggtgagggtttgtatagggtatttgtacaacgcaaatcagaagaactatggtat
gagatgcaggatttgcatgtctccgaaacacttcctcatttggttgcgctgtcagaagct
tatatgcaaatttatgaacagcaaggctga
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