Vigna unguiculata (cowpea): 114195397
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Entry
114195397 CDS
T06017
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vun03021
]
114195397
Transcription machinery [BR:
vun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
114195397
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
TEX33
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
114195397
NCBI-ProteinID:
XP_027941652
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Position
8:complement(19987817..19993397)
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AA seq
574 aa
AA seq
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MKPQPQRVLVDSICVDSGKHCSSRIPALKNCLIFYALNTAWKPGMGVVTVSTSAARTPLR
LSAKLISRQQAHKRLLIVAFKGNKSNKTTLVSPQEQIPLPVETAKKQRKRIEKSNESLKR
VRAVSTDETTPFTMVVNYNEAAAKLENIYKLSSVSDACKTEDIDSKTKRVFRRRKKVGDE
HDDRNDDNVVRNLNKKAKRLSLDKRIALKRNAKEKVVVQAQKKRDVNRVEKIDALIREYS
ASTDLVSMDWKKMKIPPVLPSSEHAWLFKLMEPMKFMSNSLGREGCIEQRLLLTALLQVR
EDLQAAGKEISDGELADAKSISIVHVRKAIEVGQAARNKLIKHNLRLVLFVINKYFQDFA
SGPRFQDLCQAGVKGLITAIDRFESKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLD
RVRADIHRAKLELTFEHQRSPTEEEVLKRIGISPERYYDVLRASKPILSLHSRHITTQEE
FINGITDLDGVDGDNRRQVAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAG
NLNISREMVRKHEVKALMKLKHPARLDYLRRYVV
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccacaacctcaacgcgttctagtagattcaatctgcgtggactcagggaaacat
tgcagttcaaggatccctgcattgaaaaattgtttaattttttatgctctaaacacggct
tggaaacctggcatgggagttgttactgtttctacctcagctgctaggactccgttaaga
ttgagtgcgaagttgatcagtcgtcagcaggcacataagcgactcttaatagtagctttt
aaaggaaataaatcgaataaaaccactttggtttcacctcaggagcaaattcctctaccc
gtggaaacggcaaagaaacaaaggaaaaggatagaaaagagtaatgaatcgctgaagaga
gtgagagctgtctctactgatgaaaccactccattcaccatggttgtgaactacaatgaa
gctgcagccaaacttgaaaatatatacaaactcagctccgtatctgatgcttgtaagacg
gaagatatagatagtaaaacaaagagagtattccggaggaggaagaaggttggtgatgaa
catgatgacagaaatgatgataatgtggttagaaacctgaataagaaggccaaacgattg
agtcttgataaaaggattgcattgaaaaggaatgcaaaggagaaggtggttgttcaagct
cagaaaaaaagagatgttaatagagtagaaaaaattgatgcgcttatcagggaatattca
gcatcaactgatttagttagcatggactggaagaaaatgaaaattccgccagttcttcct
tcttcagaacatgcatggttatttaagttgatggaacctatgaagttcatgtcaaattca
cttgggcgtgaaggatgtatagagcagaggttgctcttaactgcactcctacaagtgaga
gaagatttacaggcagcagggaaagaaatttcggatggtgaactagcagatgcaaaaagc
attagcattgttcatgtaaggaaagctatagaggttggtcaagctgcgagaaacaagctc
ataaagcacaatctccgacttgtattgttcgtgattaacaaatattttcaagattttgca
agtggtccaaggtttcaagatctttgtcaggctggagttaagggacttatcactgcaatt
gatcgatttgagtcaaaaaggagacttcagctatctacatacagtctattttggattaga
cattcaattgttcgttccataaccctctcaagcttcacacgtgttccttttggacttgac
agggtcagagcagatatccatagagcaaaactcgagttaacatttgagcaccagaggtca
cctacggaagaggaggtactaaaaagaattgggatctcccctgaaagatattatgatgta
ctgagggcatcaaaacccattctatcccttcattcaagacatataaccacgcaggaagag
tttattaatgggattactgatcttgatggtgtggatggtgataataggaggcaagttgct
gttctaagacttgctcttgatgacgtgcttgattccttgaagccaaaggaaagcttagtg
attagacagagatatggacttgatggcaagggtgacagaacattgggagaaatcgctggg
aacttgaatatttcgagggaaatggttcggaagcatgaagtcaaggctctcatgaagctt
aagcaccctgctcggttggattatctccgtcgctatgttgtatag
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