Vigna unguiculata (cowpea): 114195421
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Entry
114195421 CDS
T06017
Name
(RefSeq) nijmegen breakage syndrome 1 protein isoform X1
KO
K10867
nibrin
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114195421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vun03032
]
114195421
03400 DNA repair and recombination proteins [BR:
vun03400
]
114195421
DNA replication proteins [BR:
vun03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
114195421
DNA repair and recombination proteins [BR:
vun03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
114195421
BRCA1-C complex
114195421
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FHA
BRCT
PTCB-BRCT
Nbs1_C
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
114195421
NCBI-ProteinID:
XP_027941692
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Position
8:complement(31086000..31094207)
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AA seq
560 aa
AA seq
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MVWGLFPVDPLSGEDKYYIFKTGIYKVGRKGCDVIITKDKGVSRVHAEIVVNTMNLVNSL
PNECSHLSPSIHIRDCSKYGTFISKNVGPKKKVHELPNKQTPLEDGDFVSFGTGSATYKF
CHVPLVFFICSSNEVDQSFQEKISSIGASFTHTLGEGCTHVLVDQLMPLKKDLVDAVVAK
KSCVLKNWLEFFAEKNISIEIPSCHSRYIPTVSVDGESIKIVDPRSREDCLKGYTFLLES
EHLYKFQDQLKSLLEVAGAKVVSSGEFCSNSQDSNYGEDNHVVCVIPERPACKSNLSDKL
NSLLRVSEIDIICAALSGQLDLSILRSPCILVSSSCSTDETIVADSDTEVETATSARSTE
ALSNDNNVKYEKTEEIYDDSYTLDKRKHESIEASSDDVLTRLHDIKRTKTEKSLDGASVR
SHATNFGNDNDGVKVKKDNVDDNETGNSDVVYSQNLIVRDTNIRSSISTSPSSSFPNFKC
FRKAHTQSGNSFDNLVPFAKYPYKDSDCGDDEMSELVKEEKRRKKMEAVADELFNNEKAR
KRGAAGSRGTVGSLRSILSS
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggggactcttccccgttgatcctctttcaggtgaagataagtactatattttc
aaaactggaatttacaaagttggtcgaaaaggttgtgatgtgataatcactaaagataaa
ggtgtttctcgggttcatgcagaaatagttgttaatacgatgaacctggtaaattcttta
ccaaatgaatgttctcatttgtcacccagtatacatattagagattgctccaagtatggg
acatttattagcaaaaatgttgggcccaagaaaaaagttcatgagctaccaaacaaacaa
acaccactagaggatggtgactttgtctcttttggcaccggtagtgctacctataagttt
tgccatgtacccctcgtttttttcatctgttcctcaaatgaagtggatcaatcctttcaa
gagaaaatttcatcaattggtgctagttttactcataccttaggtgaagggtgcacacat
gtactggtagatcaactcatgccgttgaagaaggatcttgttgatgctgttgtggcaaaa
aaatcttgtgttcttaaaaattggcttgagttttttgcggaaaagaatatcagcattgaa
attcctagctgtcattctagatatattccaacagtgtcagtggacggagaatctataaaa
attgtcgaccccagatcgcgtgaagattgtttgaaaggatacacttttttgttggaatct
gagcatttgtataaatttcaggatcagctaaaatctttattggaagtggctggtgcaaaa
gttgtttcctccggagagttttgttcaaatagtcaagattcaaattatggagaggataat
catgtggtttgtgtcatcccagaaagaccagcatgcaagtctaatctctctgataaactg
aattccttgcttagagttagtgagatagatataatttgtgctgctctgagtggacagcta
gatctctctattttgagatcaccatgcatacttgtttcgtcatcatgctctacagatgag
acaattgttgcagattcagatacagaagttgaaacagccacgtcagcccgttccactgaa
gcattaagcaacgacaataatgtaaaatatgaaaaaacagaagaaatatatgacgattct
tacactttggataagagaaaacatgagagtatagaggcatcctcagatgatgttttaacc
agattgcatgacattaaacgtacaaaaacagaaaaatccttggatggtgcttctgtcaga
tcacatgctaccaacttcgggaacgataacgatggtgtcaaagtaaagaaagacaacgtt
gatgataatgaaactggaaattcagatgttgtttacagccaaaatttaattgttcgagat
acaaacatacggagtagcataagcacttcaccaagcagcagttttccaaattttaaatgt
ttcagaaaggcacacactcagtcaggtaatagctttgacaatcttgttccatttgcaaaa
tatccatacaaggattctgactgtggggatgatgaaatgtctgagttagtgaaggaggag
aaaaggcgtaagaaaatggaagctgtcgcagatgaactatttaataatgagaaggcgagg
aaacgaggcgcagctggttcacgaggcactgttggttctcttcgtagcattctttcttca
tga
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