KEGG   Vigna unguiculata (cowpea): 114195468
Entry
114195468         CDS       T06017                                 
Name
(RefSeq) DNA repair protein RAD4
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
vun  Vigna unguiculata (cowpea)
Pathway
vun03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vun00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    114195468
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vun03400]
    114195468
DNA repair and recombination proteins [BR:vun03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      114195468
SSDB
Motif
Pfam: BHD_3 Rad4 BHD_1 BHD_2 Transglut_core
Other DBs
NCBI-GeneID: 114195468
NCBI-ProteinID: XP_027941751
LinkDB
Position
8:32088351..32095989
AA seq 925 aa
MRRRSASQRKRQPSTSEDQTGAQQNSEDGNKFQSPSDNGALTEISREAVGKLLRRANKVG
TSRRKKTAEFEPEQNGTQVLDPMLQPKTSEVGHCSRNPSGNASAGEKCSSSGEDHLDNKE
ELDDSDWEDGVVARDDHPVTIELNMTPNSTVKKQVRRASAEDKELAELVHKVHLLCLLAR
GRLIDNACDDPLIQASLLSLLPAHLLQLSNVEKLTSKDLYPLISWFHNNFHVKNSTSRET
SPCFGLASALELHEGSPEEIAALSVALLRALNLTARFVSVLNVSPLKPFQVASGSSCGIF
KTSTPMISKRKLDFKSPQEALSCSERENACESSLAHSQKSKKCRVTKHMDQSRDPPIVEV
RNDSAAKSKASETQDSNLESCLTDKSRKSKRKGDLEFDMQLEMALSATAVESEESKNKSA
ANPESSCFSCPSKRVKRVTVEESSTSSQVISTAIGSMKVGSPLYWAEVYCSEENLTGKWV
HVDAVNLIIDGEDKVEAMVAACKTSLRYVVAFAGQGAKDVTRRYCMKWYKIASHRVNSTW
WDPVLAPLRDLESGATGGVNDLRKSQIISKQSDTRDSFVPTRSSIEDIELETRAFTEPLP
TNQQAYKSHPLYAIEKWLTRYQVLHPKGPILGFCSGHPVYPRTCVQTVKTKERWLREGLQ
VKPNEYPVKELQRSIKPQKVQDSEADDYGCSDSMDKIKLYGKWQLEPLNLPHAVNGIVPR
NERGQVDVWSEKCLPPGTVHLRFPKAFSVAKRLEIDYAPAMVGFEFKNGRSYPVFDGIVV
CSEFKDVLLEAYAEEEERRQAEEKKRDETQALSRWYQLLSSIVTRQRLNNRYISNSLPSE
MPTSGQCMNNESITIVGESYDKNHNVRHQQQVEQCDTTSVVDASLSTPVKDHEHVFLKEF
ESFDSETSLLTKRCQCGFSVQVEEL
NT seq 2778 nt   +upstreamnt  +downstreamnt
atgcgacgcagaagcgcttcccagcggaagagacaaccctcaacttcagaagatcaaact
ggagcccaacaaaactcagaagatggaaacaaatttcaatcacctagtgataatggagca
ctgaccgaaatatctcgagaggctgttggaaagcttctacgccgtgctaataaagttggc
acttcccggagaaaaaagactgctgagtttgagcctgaacaaaatggaacccaagtcttg
gatccaatgcttcaaccaaaaacttcagaggttggacattgtagtagaaatccctcggga
aatgcttctgctggggagaaatgtagtagttcgggtgaggaccacttggataacaaggaa
gagctggatgactccgattgggaagatggtgtagttgccagggatgatcatcctgtaacc
attgaattgaatatgacccctaattcaactgttaagaaacaagtccgacgagcttctgcc
gaggataaggagttggctgaacttgtacacaaggtccatttactctgtttactcgcacga
ggaagattaattgacaatgcttgtgatgatcctcttattcaggcttcgctgctttctcta
cttccagcacacttgctccagctatcaaatgttgaaaaactcacttcaaaagatctatat
cctttaatatcatggttccacaacaatttccatgttaaaaacagtacgagtcgagaaact
tcaccatgctttggtttggcatcagctttagaattacacgagggcagtcctgaagagatt
gcagcattatcagtggctctattaagagctttaaatcttacagccaggtttgtgtccgtt
ttgaatgtttctcctcttaaaccgtttcaagttgcaagcggatctagttgtgggatattt
aaaacttctacaccaatgatatctaagcgaaaattggattttaaatcacctcaagaagca
ttatcttgtagtgagagagagaatgcatgtgaaagttctcttgcccattctcagaaaagt
aagaaatgtcgtgtgacaaagcacatggatcagtctagagatcctcctattgttgaagtg
agaaatgatagtgctgcaaaatcgaaagcttctgagacgcaagatagtaacctggaatcg
tgtctcactgacaaatctcgtaagtcaaagaggaaaggagatcttgaatttgatatgcag
ttggaaatggctctttctgctacagccgttgaatctgaggagagtaaaaacaagtcagct
gcaaatcctgagtcttcgtgtttttcttgtccatccaaaagagtgaaaagggttaccgtt
gaagaatcatcaacctcctcccaagtaatttctacagcaattggatcaatgaaagtagga
tcccctctgtattgggcagaagtatattgcagtgaagaaaatttgacaggaaagtgggtg
catgttgatgctgtgaatttgattattgatggagaggacaaggttgaagccatggtggcg
gcatgcaaaacatctttgagatatgttgttgcctttgctgggcaaggggccaaagatgtg
acccgcaggtattgtatgaagtggtacaagatagcatcacatcgagtcaattcaacatgg
tgggatccggtgttggcaccattgagagacttggagtcgggagcaactggaggtgtgaat
gatttaagaaaaagccaaatcatttctaagcaatccgacacgagggattcttttgtccct
actaggagctctattgaggatattgagttggaaactagagcatttactgaacctcttcct
accaatcagcaggcctacaaaagtcacccactttatgccatagaaaaatggcttacaagg
tatcaagtacttcatccaaagggtccaatactgggattttgttcaggtcacccagtttat
cctaggacttgcgtgcaaacagttaagacaaaagagaggtggctgcgagaagggcttcaa
gttaaaccaaatgaatatcctgtgaaggagcttcaacgttccataaagcctcaaaaagta
caagattctgaagcggatgactatggctgcagtgattctatggacaaaatcaaactttat
gggaagtggcaactggaaccgttaaatttgcctcatgcggtgaatgggatagttcccagg
aatgaacgaggtcaagtagatgtttggtctgaaaaatgtcttccaccagggactgtacac
ttaaggtttccaaaggccttttctgttgccaagagactcgaaattgattatgcgcctgct
atggttggttttgaattcaaaaatggtcgttcatatcctgtctttgatggtattgtggtg
tgttccgagttcaaggatgtactgctagaggcttatgcagaggaagaagaaaggcgacaa
gcagaagaaaagaaaagggatgaaacacaggctcttagtcggtggtaccaacttctttcg
tctattgtaactcgtcaaaggttaaataatcgttatattagtaacagtttgccttcagag
atgccaactagtggccaatgtatgaacaatgagtcaattaccatagttggtgagagttat
gacaagaatcataacgtaagacaccaacaacaggtggagcaatgtgatactactagtgtt
gttgatgcatcattaagcactcctgtaaaagatcacgagcatgtgtttttgaaagagttt
gagagctttgacagcgaaacctctctattgacaaagcgatgtcagtgtggattttcggta
caagttgaagaattatag

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