Vigna unguiculata (cowpea): 114195843
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Entry
114195843 CDS
T06017
Name
(RefSeq) protein GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03013
Nucleocytoplasmic transport
vun03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114195843
03015 mRNA surveillance pathway
114195843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114195843
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114195843
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
DUF5388
Motif
Other DBs
NCBI-GeneID:
114195843
NCBI-ProteinID:
XP_027942065
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Position
1:complement(41123524..41131137)
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AA seq
635 aa
AA seq
DB search
MGAVKLNIRNCSQRVDGVAADPEPDWSFDDLVSELNDLETKLASATSSNERSIPFEKSRT
RGREIDKGRTFVLRADEYEMEDSESEDDDHVDKALVVAGNAKRFTCDEVYLSDSDDDSDI
VSGFEVRPCLMDELGEVEGALFELAQEHQLRVKDEIRNKISALETALVNETQNSASSLLR
VEKYKEARQELDKKFDTQYQRRIAEALDNHLTAVQRDRELRSQIEERKIRSDAAAYEEAK
RKAAFEKLQQEKARAEAEAKLADETKREAERKATMEARKQAAMEAEKGAAVAEAEKREVK
EANETSKRVTSGGTQQAAGDSTDTSSVSNAENKEYGNLYRAAASALNLEQGRLQKLKELC
ERNQMIRSSSNKDYTRHEGNISRNIRQIRGVRDNVRSKASELIKLLNDPQYPQSVSIEIF
AKKVVSYCENPGNAPFASAYVIVLVTSQIPQAMDIFLAELHMACLYTVPKHLLYKKTAFQ
SKEAYFRSIGYREVDGKLETTEDYLKRLESYMKVYGALVQTETTNVQNFHGLQEGWAWLA
RFLNTLPANHYTAVSLNAFLQMAGFALFKRYKSQFLKMLNVVSENFLVDLKSRNISELTK
TITEIQTYIEDKKFLQEPEGKSLQSNLLSNVYVNY
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctgtgaaattgaatattcgtaattgttcgcagagagtggatggcgtggccgca
gacccggaacctgattggagttttgacgatcttgtttcggaactcaacgatttggagacg
aagctcgctagtgctacttcttccaatgaacgttctatacctttcgaaaaatcaagaact
cgtgggagagaaattgacaaaggtagaactttcgtattgcgggccgatgagtatgagatg
gaggactcggagagcgaggatgatgatcatgtggacaaggcattggtagtggctggcaat
gccaaacggttcacttgtgatgaagtttatctgagtgacagtgatgacgattcagacatt
gtttctggttttgaagtgcgaccttgcttgatggatgaattgggagaggtagaaggtgcc
ttgtttgagttggcgcaggagcaccagcttagggttaaggatgaaattaggaataagatt
tcggcattggagacagctttggtgaatgaaactcaaaattctgcttcttccctccttcga
gttgagaaatataaagaagcaaggcaggaattggataaaaagtttgacactcaatatcag
cgtaggattgcagaagcacttgataatcacttgacagctgttcaacgagaccgtgaactc
agatcacaaatagaagaaaggaaaataagaagtgacgcagcagcttatgaagaggccaag
agaaaggctgcttttgaaaagctgcagcaagaaaaggctagagctgaagcagaggccaaa
cttgctgatgaaacaaaacgagaagctgagagaaaagcaacaatggaagccagaaaacag
gcagcaatggaagctgaaaaaggagcagcagtggcagaagctgaaaaaagagaagtaaag
gaagccaatgaaacttccaaaagggttacttctggagggacccaacaagctgctggggat
tcaacagatacatcaagcgtatccaatgctgaaaacaaggaatatggtaatttatatcga
gctgcagcaagtgctttgaatctggaacaggggagactgcagaaattgaaagagctatgt
gagagaaaccaaatgataagatcaagttctaataaggattacacccggcacgagggtaat
atttcccggaatataaggcaaataaggggtgtaagagacaatgttaggtcaaaagccagc
gaactgattaaacttttgaatgatcctcaatatcctcaatcagtcagcattgagatattt
gctaaaaaggttgtttcgtactgtgaaaaccccgggaatgctccctttgcaagtgcctat
gtcatcgttcttgttacatctcagattccacaagcaatggatatttttcttgctgagctt
cacatggcttgcctttataccgttccaaagcacctgctttacaagaagaccgcctttcaa
tcaaaggaggcatacttcagaagtattggttatcgagaagtggatggaaagttggagact
acagaagattatttaaagcggttagaatcatacatgaaggtgtatggtgcactggttcag
actgaaactacaaacgttcaaaatttccacggcttgcaagaaggttgggcttggctcgca
agattcttgaacacactcccagcaaatcactacacagctgtttcgctcaatgcattcttg
caaatggctggatttgctctctttaaaagatataaatcgcaattcttgaagatgctgaac
gtcgtctctgagaactttttagttgatctgaaatcacggaatatatcagagttgacgaag
acgattacggagattcagacttatatagaagataagaagttccttcaagagccagaagga
aagagcctgcagtctaatttgttatctaatgtgtatgttaattattga
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