Vigna unguiculata (cowpea): 114196237
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Entry
114196237 CDS
T06017
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB4
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03022
Basal transcription factors
vun03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114196237
09124 Replication and repair
03420 Nucleotide excision repair
114196237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vun03021
]
114196237
03400 DNA repair and recombination proteins [BR:
vun03400
]
114196237
Transcription machinery [BR:
vun03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114196237
DNA repair and recombination proteins [BR:
vun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114196237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
114196237
NCBI-ProteinID:
XP_027942620
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All DBs
Position
9:33452293..33458017
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AA seq
292 aa
AA seq
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MPSAPSKIYADDVSLLVVTLDTNPFFWATFPFPFAEFLSQVLAFLNSILLLGQLNQVIVI
ATGCNSCAYVYDSSSERSHGATTGTMPALYSNLLHNLNEFLAKDRQLDASQKPGTVPSSL
LSGSLSMALCYIQRAFRLGPMPPQPRILCLQGTADGPEQYVAIMNAIFSAQRSTVPIDSC
YIGSNNSAFLQQASYITGGIYYKPPQLDGLYQYLSTVFATDLHSRAFLRLPKSVGVDFRA
SCFCHKRTIDMGFVCSVCLSIFCEHHDKCSTCGSVFGQAQLDASAANRKRKA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgcaccttccaaaatctacgcagacgatgtgagccttctggttgtgacgcta
gacaccaatcctttcttctgggccactttccccttccccttcgccgagttcctctcccaa
gtactcgcctttctcaactcgatcctgctcctcggccagctcaaccaggtcatcgtcatc
gccactggatgcaactcctgcgcctatgtttacgattcctcttccgaacggagccacggt
gccaccaccggtacaatgcccgcgctttattccaacctactccacaatctcaacgagttt
ctcgctaaggaccggcaattagacgcttctcaaaaaccgggaaccgtgccttcttcgctc
ttatcgggctccttgtccatggcgctttgttatatacagagagcttttcgtttaggaccc
atgcctccgcagcctcggattttatgtttgcaagggactgccgatggaccagaacagtat
gtggcaatcatgaatgcaatattctctgcacagcgttctactgttcctatagattcttgt
tatattggctccaacaactctgcattcctccagcaggcttcatacataactggtggaata
tattacaagcctcctcaactggacgggctttatcaatatctttcaacagtttttgcaact
gatttacattctcgtgcatttttaaggcttcctaaatctgtgggtgtggattttcgtgca
tcgtgcttctgccataagcgaacaattgacatgggattcgtatgttctgtatgcttgtcc
atattctgtgagcatcatgataagtgttcaacctgtgggtctgtatttggtcaagctcaa
ctagatgcttcagcagctaacaggaaaagaaaggcgtga
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