Vigna unguiculata (cowpea): 114196298
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Entry
114196298 CDS
T06017
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114196298
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vun01009
]
114196298
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vun03019
]
114196298
03036 Chromosome and associated proteins [BR:
vun03036
]
114196298
Protein phosphatases and associated proteins [BR:
vun01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
114196298
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
114196298
Chromosome and associated proteins [BR:
vun03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
114196298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
114196298
NCBI-ProteinID:
XP_027942698
LinkDB
All DBs
Position
9:12040648..12057942
Genome browser
AA seq
506 aa
AA seq
DB search
MAYYDSAPSVPLLWNFSQVLGQQLPNEPLQNDDIITTIAFDKRGDHLAVGDRGGRVVIFG
RDDRKKNVSSNRRRDLEQRDFASQPPEFRYKTEFQSHEPEFDYLKSVEIEEKINKVRWWM
THDSLQFILSTNDKTIKLWKVKEHKVKQVKEMAPPLCSENMFLAGKSFVPGLETKSAANG
YRLEWIEKTPKNHLPPQDVDSEIGGMEDPFHAKCQKVYAYAHSFKINSISNNSDYETFVS
ADDLRINLWNLEVSDQCFNIIDMKPSNMEDLTEVITSAEFHPLHCNLLAYSSSQGLIRLS
DLRHSAICDHASRIFQHGESYGSKSFFTEITSSISDIKFLNDGQHLLSRNYMNMKLWDMR
RESSPVAIFKIHEHLRPKLPELYNNDCIFDKFECCFSGDGLHFATGSYSNILRIFSPGSG
REEGIKLEIRGNSDRKAIHQAKSRARRPSLSNIMPRGIYHHAHVDSESSSIDSLCNLSSR
LLQVAWHPTCNLVACAAESSLVLYYA
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcttactacgattctgcgccttctgtccctctcctatggaacttctctcaagtactc
ggccaacaactacccaacgagcctctccagaacgacgacatcataaccaccattgctttc
gataagcgcggcgatcatctcgccgttggcgatcgaggtggacgcgttgtaatattcgga
agagacgatcgaaaaaagaatgtttcgagtaatcgaagaagggatttggagcagcgggat
ttcgcctcgcagcctcccgaatttcgttacaagacagaatttcagagccacgaacccgag
tttgattacctaaagagtgtggaaattgaagagaagattaacaaagtaaggtggtggatg
acccacgacagtttgcaatttattctttcaaccaacgataaaacaattaaattgtggaag
gttaaggagcataaggtgaaacaagttaaagaaatggcccctcctttgtgctcagaaaat
atgtttttggctggaaaaagtttcgtaccagggctagaaaccaagtctgctgctaatggc
tatcgcttggaatggatagagaagacgcctaagaatcatttgccgcctcaggacgttgat
agcgagattggtggaatggaagacccttttcacgcaaagtgccaaaaggtgtatgcttat
gctcacagtttcaaaattaactccatctcaaataatagtgattatgagacctttgtctcg
gcagacgaccttagaatcaatttgtggaatcttgaggtcagtgatcagtgtttcaacatt
attgacatgaagccatcaaacatggaggaccttaccgaggtcataacatcagctgaattt
catcctttacattgtaacctccttgcatatagcagctcacaaggtttaattcgtctatct
gatttgcgacattcagcaatatgtgaccatgcttcaagaatatttcaacatggagagagt
tatggatcaaagtcattttttacagaaatcacttcttccatctcagacataaagttttta
aatgatggccagcatcttctaagtcgcaattacatgaatatgaagctttgggacatgcgt
agggagtcatctccagtcgcaatattcaaaattcacgagcatctgcgtcctaagttgcca
gagctatataataatgactgcatatttgataaatttgagtgctgctttagtggtgatgga
ctccattttgcaactggttcttatagcaatatcttgcggatattctccccaggttctgga
agggaggaagggattaaactagaaattagaggaaattctgataggaaggctattcaccaa
gccaagtcaagggctagaaggccttctctaagcaacataatgcctcgtggaatttaccac
cacgctcacgttgattcggagtctagcagcattgactctctttgtaatttaagctccagg
ctgctacaagtagcttggcatcctacatgcaatctagttgcatgtgctgctgaaagtagc
ctagtcttgtactatgcataa
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