Vespa velutina (Asian hornet): 124946472
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Entry
124946472 CDS
T09814
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
vve
Vespa velutina (Asian hornet)
Pathway
vve03013
Nucleocytoplasmic transport
vve03015
mRNA surveillance pathway
vve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124946472
09122 Translation
03013 Nucleocytoplasmic transport
124946472
03015 mRNA surveillance pathway
124946472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vve03019
]
124946472
03041 Spliceosome [BR:
vve03041
]
124946472
Enzymes [BR:
vve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124946472
Messenger RNA biogenesis [BR:
vve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124946472
Spliceosome [BR:
vve03041
]
Complex C
Other components
EJC/TREX
124946472
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
124946472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
124946472
NCBI-ProteinID:
XP_047343163
LinkDB
All DBs
Position
2:11782952..11788087
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AA seq
424 aa
AA seq
DB search
MADNDDLLDYEDEEQTEQVVDGSGDVPAKKEVKGTYVSIHSSGFRDFLLKPEILRAIVDC
GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELTENQVYVLVMCHTR
ELAFQISKEYERFSKYMPYVKVAVFFGGLPIQKDEEVLKNTCPHIVVGTPGRILALVRNK
KLNLKHLKHFILDECDKMLELLDMRRDVQEIFRSTPHGKQVMMFSATLSKEIRPVCKKFM
QDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMAL
AQLLTEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD
MPEDSDTYLHRVARAGRFGTKGLAITLVSDENDAKILNDVQERFDVNITELPDEIDLASY
IEGR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcagataacgatgatcttttggattacgaagatgaggaacaaactgaacaagtagtc
gatggaagtggagatgtccctgctaagaaagaagtaaaaggcacatatgtgtctattcac
agcagtggttttagggattttcttcttaaacctgaaatattaagagcgattgttgattgt
ggattcgagcatccttctgaagtacaacatgaatgtattcctcaagctgtacttggtatg
gatattctgtgtcaagcaaaatctggtatgggaaagaccgctgtatttgtattagccaca
ttgcaacagttggaattaacagagaaccaagtctatgtcttagtaatgtgtcacacgaga
gagcttgcatttcaaattagtaaagaatatgagagattcagcaaatatatgccttatgta
aaggtagcagttttttttggtgggttaccaatacaaaaggatgaagaagttttgaagaat
acttgccctcatattgtagtaggcactccaggtcgtattcttgctcttgttcggaataaa
aagttgaaccttaaacatttgaagcacttcatacttgatgaatgcgacaagatgcttgaa
ttgttagacatgcgcagggatgtacaggagatatttagaagcacaccacatggtaaacaa
gtcatgatgttcagcgctacactgtccaaagagatccgccctgtctgcaagaaatttatg
caagatcccatggaagtctatgttgacgacgaagcgaagctcacgttacatggcctacaa
cagcattacgtgaaactcaaagaaaatgagaaaaacaagaagctttttgaattgttagat
gttcttgaattcaatcaggtagtgatatttgtaaaatcagtgcaaagatgcatggctctt
gcacaacttttaacagaacaaaattttcctgctattggtatccatagaggaatgacgcaa
gaagaacgtttatcaagataccaacaattcaaagatttccaaaaacgaattttagtagcc
actaatttattcggacgaggaatggacattgaacgtgttaatattgtatttaattatgac
atgcccgaagattctgatacatacctccacagagtagcacgagctggacggtttggtaca
aagggtcttgctatcacgttagtaagcgatgaaaatgatgccaaaatattgaacgatgta
caagaacgttttgatgtaaacattacagaattgccagatgaaatagatcttgcatcatat
attgaaggacgataa
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