Vespa velutina (Asian hornet): 124948273
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Entry
124948273 CDS
T09814
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
vve
Vespa velutina (Asian hornet)
Pathway
vve03020
RNA polymerase
vve03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vve00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124948273
09124 Replication and repair
03420 Nucleotide excision repair
124948273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vve03021
]
124948273
03400 DNA repair and recombination proteins [BR:
vve03400
]
124948273
Enzymes [BR:
vve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124948273
Transcription machinery [BR:
vve03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
124948273
DNA repair and recombination proteins [BR:
vve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
124948273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
DUF3137
Motif
Other DBs
NCBI-GeneID:
124948273
NCBI-ProteinID:
XP_047347606
LinkDB
All DBs
Position
4:3728530..3735543
Genome browser
AA seq
1904 aa
AA seq
DB search
MATSDSKAPLRTVKRVQFGILSPDEIRRMSVTDGGIRFPETMEGGRPKLGGLMDPRQGVI
DRNSRCQTCAGNMTECPGHFGHIDLAKPVFHVGFITKTIKILRCVCFYCSKLLVSPHNPK
IKEIVMKTKGQPRKRLTFVYDLCKSKNICEGGDEMDINKENSEQQPTDRKPGHGGCGRYQ
PNLRRSGLDVTAEWKHVNEDSQEKKIVLTAERAWEILKHITDEESFILGMDPKFARPDWM
VVTVLPVPPLSVRPAVIMYGSAKNQDDLTHKLADIIKSNNELLRNEQAGAAAHVISENIK
MLQFHVATLVDNDMPGMPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVIT
PDPNLRIDQVGVPRSIAQNLTFPEIVTPFNIDKMQELVRRGNSQYPGAKYIVRDNGERID
LRFHPKPSDLHLQCGYRVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSC
TSPYNADFDGDEMNLHVPQSMETRAEVENIHVTPRQIITPQANKPVMGIVQDTLTAVRKM
TKRDVFIEKEQMMNILMFLPSWDGKMPQPCILKPKPLWTGKQIFSLIIPGNVNMIRTHST
HPDEEDDGPYKWISPGDTKVMVEHGELVMGILCKKTLGTSAGSLLHICMLELGHEVCGRF
YGNIQTVINNWLLLEGHSIGIGDTIADPQTYLEIQKAIKKAKEDVIEVIQKAHNMELEPT
PGNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACV
GQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLI
DTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLCGETVEFQNLPT
IKLSNKAFEKKFKFDPTNERYLRRIFNEDIVREMMGSGEVISELEREWEQLNRDRAVLRE
IFPSGESKVVLPCNLQRMIWNVQKIFHINKRAPTDLSPMRVIQGVKDLLEKCIIVAGDDR
LSKQANENATLLFQCLVRSTLCTKCVSEEFRLSSEAFEWLIGEIETRFQQAQVSPGEMVG
ALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGAAA
RDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIAEDQEFVNVYYEMPDFDPTKIS
PWLLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDDNK
FQDTEEETVDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDSKKRIVITETGE
FKAIAEWLLETDGTSLMKVLSERDVDPVRTFSNDICEIFQVLGIEAVRKSVEKEMNAVLQ
FYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLDAASHAE
VDPMRGVSENIIMGQLPRIGTGCFDLLLDAEKCKAGIEIPMAVGAGVMGTAGMFFGSVAT
PSMSPQMTPWMGATPGYGASSMSPALGSGMTPGGACFSPSGASDASGLSPAYSAYSPQPG
SPGSPGPSMSPYPMSPAGGASPSYSPTSPAYLPTSPSMTPSSPNYSPTSPTYSPTSPNYS
PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP
SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTP
ASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSFAGTSPQYTPASPT
YSPTSPTYSPTSPSYSPSSPQHTATGSTRYSPSSPNYSPTSPTYSPTSPQYSPSSTKYSP
TSPTYTPTSPSYSPTSPTYSPPVPGYSPTSPTYSPASPAYETDD
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atggccacgtccgattccaaagcacctttaagaacagtaaaaagagtgcaatttggcatt
ctttctccagatgaaatacgtcgtatgtcagttacagatggaggcatacgctttccagaa
actatggaaggaggtcgaccgaagctcggtggccttatggatccaagacaaggggtaatt
gatagaaattctcgatgtcaaacatgtgctggtaatatgacagagtgtccaggtcatttt
ggacatatagatttggccaaacctgtttttcatgttggatttattacaaagacaataaaa
atccttagatgtgtatgtttttattgttcaaaactgttagtcagtccacacaatccaaaa
atcaaagaaatagttatgaagacaaaaggtcaaccacgtaaacgtcttacatttgtatat
gatttgtgcaaaagtaaaaatatctgcgaaggaggagatgaaatggatatcaataaagaa
aattctgaacaacaacctacagatagaaaaccaggtcatggaggttgtggtaggtaccag
ccaaatttgagaaggtctggattagatgttactgcagaatggaaacatgtaaatgaagat
tctcaagagaagaaaatagttttaactgctgaaagggcgtgggaaattttgaaacacatc
actgatgaagaatcatttattcttggtatggatcctaaatttgcaagaccggactggatg
gtagttacagtgttaccagttccaccattgtcagtaagaccagcagttatcatgtatggt
tcagctaaaaatcaagatgatttgacacataaattagcagatataatcaaatcaaataat
gaattattaagaaatgaacaagctggtgcagcggctcatgttatatcagaaaatataaaa
atgttacaatttcatgtagcaacattagtagataatgacatgcctggtatgccaagagca
atgcaaaaatctggaaagccattgaaggctataaaagcaaggctaaaaggaaaagaggga
agaatacgaggcaacttgatgggcaagcgtgtagatttttcagcacgtactgtcattaca
ccagatccaaatttaagaatcgatcaagtaggcgttcctcgtagcattgctcaaaattta
acatttccagaaattgtaacgcctttcaatatcgacaagatgcaggagttagtaagacgt
ggcaattcgcagtatcctggtgcgaagtatatagtcagagataatggagaacgtatagat
ttaagatttcatccaaaaccttctgatcttcatctacaatgtggatatagagtagaaaga
catatcagagatggagatttggttatttttaatcgacagccaactcttcacaaaatgagt
atgatgggtcatagagttaaagttctcccatggagtacttttcgtatgaatttaagctgt
acatcaccctataatgccgatttcgatggagacgaaatgaatcttcatgttccacaatca
atggagacacgtgcggaagtagaaaatatacatgttactcctcgtcaaattattactcct
caagcaaataaaccagttatgggtattgtacaagatactttaactgctgtgaggaaaatg
acaaaaagagacgtttttatagaaaaagaacaaatgatgaatattcttatgtttttacct
agttgggatggcaaaatgcctcaaccatgtatattgaaaccaaaacctctttggactggg
aaacaaattttttccttgatcataccaggaaatgtaaatatgataagaacacacagcaca
catccagatgaagaagatgatggaccatataaatggatatcgcctggtgatacgaaagtt
atggtagaacatggagaattagttatgggtattctttgtaagaagactttaggtacatca
gcaggatccttacttcatatttgtatgctggaattaggccatgaagtatgtggacgtttt
tatggaaatattcagactgtgatcaacaattggttattattagaaggtcattcaattggt
attggtgatactattgctgatccacagacatacttagaaatccaaaaagctatcaagaaa
gccaaagaagacgtgatagaagttattcaaaaagctcataatatggaattagagcctaca
cctggtaacaccttgaggcaaacattcgaaaatcaagtaaacagaattttgaatgacgcc
cgtgataaaactggtggctctgctaaaaaatctttgactgaatataacaatttaaaagct
atggtcgtatcaggttcaaaaggatcaaatattaatatttcccaagttattgcttgtgta
ggacaacaaaacgttgaaggtaaaagaatacctttcggttttcgtaaaagaactttgccg
cattttatcaaggacgattatggtcctgagtctagaggatttgttgagaattcatactta
gccggtcttacaccatccgagttctatttccatgctatgggcggtcgtgaaggtcttatt
gatactgctgtcaaaactgcagaaacaggatatattcagcgtcgtttgatcaaagctatg
gagtccgtaatggttcattatgatggaactgtaagaaattctgttgggcaacttattcaa
ttacgttatggtgaggatggtttatgcggtgaaacggtcgagtttcaaaacttacctact
attaaactcagcaataaagcatttgaaaagaagtttaaatttgatccaaccaacgaacga
tatctgagacgtatatttaatgaagatattgtccgtgaaatgatgggatcgggtgaagta
atttccgaattagaaagagaatgggaacaacttaatagagatagagctgttcttcgtgaa
atttttcctagcggagaatccaaagttgtactcccatgtaatttacagagaatgatttgg
aatgtccaaaaaattttccacatcaataaaagagctcctactgatctcagtcctatgaga
gtcatacaaggtgtaaaagatcttttagagaaatgtataattgtagctggagatgataga
ttaagtaaacaagctaatgaaaatgcaacattgttattccaatgtttagtgagatcaact
ctatgtacaaaatgtgtatctgaagaattcagactttccagtgaagcttttgaatggctt
attggagaaattgaaactagattccaacaagcacaagtgtcaccaggtgaaatggtaggt
gcattagctgcacaatctcttggtgaacctgcaacacagatgacactcaatactttccac
ttcgccggtgtctcgtcgaagaacgtaactcttggtgtacccagattgaaagaaattatt
aacattagcaaaaaaccaaaagcaccttcattgacagtatttttaactggtgctgctgcc
agggatgctgaaaaagcgaaaaatgttctctgtcgtcttgaacatactacgttacgaaaa
gtaactgccaataccgcgatttattatgatcctgatccacaaaatactgttattgctgaa
gatcaagagtttgtcaatgtatactacgaaatgccggacttcgatccaacaaaaatatca
ccttggttgttacgtattgaattggatagaaaaaggatgacggataaaaaattgaccatg
gaacagattgcagaaaaaattaatgcaggttttggagatgatttgaattgtatattcaat
gatgataatgcagaaaaattggtcttacgaattaggattatgaatagtgatgacaataaa
ttccaagatacagaagaagaaactgtggataaaatggaagatgatatgttccttcggtgt
atagaagctaatatgcttagtgacatgactttacaaggtatcgaagctattggtaaagta
tacatgcatttaccgcaaactgattcgaaaaagcgaattgttataacggagacaggtgaa
tttaaagcgatagcagaatggttacttgaaactgatggaacaagtttaatgaaagtgtta
agtgaaagagacgttgatccagttcgaacgttcagcaatgacatttgcgaaatattccaa
gtattaggtatagaagctgtacgaaagtctgtcgaaaaagaaatgaatgctgtattacaa
ttctatggtctttatgtaaattatcgacatctcgctttactttgtgacgttatgactgct
aaaggtcatttaatggctataactcgtcatggaatcaacagacaggataccggagcatta
atgagatgttctttcgaagaaacggtcgacgttctattggacgctgcttcgcatgctgaa
gttgatcctatgagaggagtgtcagaaaatattattatgggtcaactgccacgtatagga
actggttgcttcgatttactactcgatgcagagaaatgtaaagctggaattgaaatacca
atggcggtaggtgctggtgtaatgggaactgccggtatgttctttggtagtgttgcgact
ccgagtatgagtcctcagatgacaccgtggatgggagctactcctggttatggtgcatcg
agtatgtcgcccgctttgggcagcgggatgacaccaggaggtgcttgtttctcaccatcg
ggagcatccgatgcttcgggattgtctccagcatattccgcctattctccacaaccagga
agtcctggaagtccaggaccaagtatgagtccttatccaatgtcaccagccggcggtgct
tcgccaagttactcgcctacgtcaccagcttatttgccaacatcacccagtatgacaccg
tcgagtccgaattattcacccaccagtccaacatattcgccaactagtccgaactattca
ccaacgtcaccaagttattcacctaccagcccaagttattcaccaacaagtccaagttat
tcgccgacttcgccgagctattcgccaacatcaccaagttattcaccaacaagtccaagt
tattcgccaacttcaccgagctattcaccaacgtcaccaagttattcacctaccagtcca
agttattcgccgacttcgccgagctattcgccaacaagcccaagttactccccaacaagt
ccaagttattctccaacaagtccaagttactcgccgacaagtccaagctattcgccaaca
agtcccagttattcgccaaccagtccaagctattcacctagttcacctaattacacacca
gcctcaccgtcttattcgcctaccagtccaagttattcacctagttcacctcaatattca
ccggctagtccaagttattctccaagtagtccaaaatattcaccaacaagtccgagttac
tcgcctacttcaccttcctttgctggaacgtcaccacaatatactccagcgagtccaaca
tattctcctacaagtccaacttattcgccgacaagtccatcgtattctccaagttcacca
cagcacacggctactggtagtacaagatattcacccagcagtccgaattactcgccgacg
agtcctacgtattcgccaacgagtcctcaatattcaccttcgagtacgaaatattcgcct
acaagtcctacttatactccaacgagtcctagttattcgccaacaagtccaacgtactcg
cctccggtacctggttactctcctacgagtccaacttattcaccggcatcacccgcttac
gaaacggacgattaa
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integrated database retrieval system
