Vespa velutina (Asian hornet): 124948737
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Entry
124948737 CDS
T09814
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33-like isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
vve
Vespa velutina (Asian hornet)
Pathway
vve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124948737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vve03019
]
124948737
Messenger RNA biogenesis [BR:
vve03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
124948737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WD40_RFWD3
WD40_MABP1-WDR62_1st
eIF2A
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_WDR41
Beta-prop_WDR11_2nd
Beta-prop_SPT8
WD_LRWD1
Tricorn_2nd
Beta-prop_ACSF4
WDR54
Motif
Other DBs
NCBI-GeneID:
124948737
NCBI-ProteinID:
XP_047348769
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All DBs
Position
4:complement(1401160..1411318)
Genome browser
AA seq
1056 aa
AA seq
DB search
MSTNTQFSNLSPAISLPNMSVPPPSAPNLSAPPPNLTTINTSGSYQHRYTNHRDGNRGFF
KPFRPYHAPKVVAGGQDTLQDEFDGKRLRKSVMRKTVDYNSAIIKSLENRVWQRDYRDRR
ALQPDVIYYPDLLPPPSYVDNPINAVTTRFVKTATNKMRCPIFCMAWTPEGRRLVTGASS
GEFTLWNGLTFNFETILQAHDSPVRTMVWSHNESWMVTGDHAGYVKYWQSNMNNVKMFQA
HKEAIRGLSFSPTDHKLATCSDDGTVRIWDFLRCHEERILRGHGADVKCVHWHPQKSLVI
SGSKDNQQPVKLWDPKSGQSLATLHAHKSTVMDIKWNENGNWLVTASRDHLLKLFDLRNL
NQEVQTFRGHKKEASSVAWHPSHEGLFCSGGSDGAILFWHVGADKEVGAIEQAHDSIVWT
LAWHPLGHILCSGSNDHTSKFWTRNRPGDLMRDKYNLNTLPAGTAGVDDHEIADEAAVIP
GMGPEDRINADGELEDKSGEIPGLDLDHAVDEGKKFTNKKVPYSKPIPRNFQAQWNEMEA
EDIEQVEALNAFVNQLIETTPGAVPLSELSPTAIILYGKMIPVEPGSKLAEAIGKGNDAI
NKLVFSGEIEELRDVVGPLNSVDETEDYLQDEGEIDYSKVPDIDLPPPLPSSKFAQNPEL
LKTLNRGGKRKFDQLIGWSDGGASDRTSKIHQPVFGGVITDDVQSSDGETRYSASKSNDN
SSFQGQDEDLRRIAHGDSRSMQRGDEDLRYNTSSGPGRPGSRSEYDIRSNYGDKDFRSMN
SQGFLLKKSSENDLYDDKERDGSRWDDEKIMSSSSRKTDSNFSSSNFDKRDNMQLNIGPG
MGSNMSHIGNNMSHLPNHHNMQNINPNMPLPIPNLVQHPNMPQHPGMQNKLPHGNVQGMD
GPMPHMMHHPGMHPAFGPNGPPPPGGFGPNFRPPNGNFGPNQHFRPNPMPPFGPNQGPPF
NSNFQGTPNFRVPNSGPSNFDRPGFGPNFRGQNVGSQNAPNHFNSNFGNFGCNKNGPNRG
INRGPNDNNMGRNGYNNRGRVRDSDQSRGTRGRDNY
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccaatactcaattctcaaatctttctccggccataagtctgcctaatatgtca
gtaccgccaccatctgcgccaaatttatctgctccacctccaaatttaactactataaac
acctctgggagttatcaacatcgttatacaaatcatagagatggaaatcgtggctttttt
aaaccattcagaccatatcatgcccctaaagttgtggctggtggtcaagatactttacaa
gatgaatttgatggaaaaagacttagaaaatctgttatgcgaaagactgttgattataat
tccgctattattaaaagtttggagaatcgtgtatggcaaagagattatagggatagacgt
gctcttcaaccagatgtcatatattatcctgatcttcttccacctccaagttatgttgat
aatccaattaatgcagtcactacaagatttgtaaagactgcaacaaataaaatgcgttgt
ccaatattttgtatggcatggacaccagaaggtagacgtttagtcactggtgcatcaagt
ggcgaatttaccttgtggaatggtcttacatttaattttgaaactattcttcaggcacac
gacagtcctgtaagaacaatggtttggtctcataacgagagctggatggtgacaggagat
catgcaggttatgtcaaatattggcagagcaacatgaacaatgtcaagatgtttcaagca
cacaaagaagcaattagaggactcagtttcagtccaacggatcataaactggctacctgt
agtgatgatggtactgtcaggatttgggacttcctacgctgtcacgaagaacgaattctt
aggggtcatggtgcagatgtgaaatgtgtacattggcaccctcaaaaaagtctagtcatc
tcaggaagcaaagataatcagcaacctgtgaagctttgggatccaaagagtggacaatca
cttgccaccctacatgcacataaatcaactgtaatggatatcaagtggaatgagaatggt
aattggctagtgactgcatcgcgagatcatttgcttaaattatttgatctcagaaatctc
aatcaagaagtccaaacttttcgtggtcataaaaaagaggcatctagcgttgcatggcat
ccaagtcatgagggacttttttgtagcggcggtagtgatggtgcaatactcttttggcat
gtcggagctgacaaagaggttggtgcaatagaacaagctcatgatagtatagtatggaca
ttagcatggcatccattgggacatattttatgttctggtagtaatgatcatacttctaag
ttttggacacgtaatcgacctggtgatctcatgagagataaatacaatctcaatacatta
cctgcgggaacagcaggagttgatgatcatgaaatagctgatgaagcagcagtaatacct
ggtatgggaccagaagatagaattaatgctgacggtgagctagaagataaaagtggagaa
atacctggattggatttggatcatgcagtggacgaaggaaaaaaatttactaataaaaaa
gttccatacagtaagccaatacctagaaatttccaggctcaatggaatgaaatggaagcg
gaagatattgaacaagtagaagcattaaatgcttttgtaaatcaattaattgaaacgaca
ccaggagctgtaccgttgagcgaactttctcctaccgctattatattatacggaaaaatg
atacctgttgaacctggttcaaaattggcggaagcaattggtaaaggaaatgatgccata
aataaactagtattttctggggaaatagaagaattaagagacgtcgtgggtccattaaat
agcgtcgatgagacggaagattatttacaggatgaaggagaaatagattattctaaagtt
cccgatattgatctacctccacccttacctagttctaaatttgcacaaaatccagaatta
cttaaaactttaaatcgtggtggaaagagaaagttcgaccaattaattggttggagtgat
ggaggagctagtgatcgaacttcaaaaattcatcaaccagtattcggtggtgttattacg
gatgatgtacaatcaagtgacggggagaccaggtacagtgccagtaaatcgaatgataat
agttccttccaaggtcaagatgaggatttaagaaggattgcacacggagattcgagaagt
atgcaacggggtgacgaagacttaagatataacacgtctagtggacctggcagaccagga
tctcgatcggaatatgatataagaagtaattatggagacaaagattttagaagtatgaat
tcgcaaggatttctcttaaaaaaatcttccgaaaacgatttatacgatgataaggaacga
gatggatcccgatgggacgatgaaaaaattatgagtagtagttctagaaaaacggatagt
aatttttcaagcagtaattttgataaacgtgataatatgcaattaaatattggacctgga
atgggtagtaatatgtctcatatagggaataatatgtcccacctaccaaaccatcataat
atgcaaaatattaatcctaatatgccgctaccaattccgaatctcgttcagcatccaaat
atgcctcagcatcctggtatgcaaaataaattgcctcatggaaatgttcaaggaatggat
ggtccaatgccacatatgatgcatcatcctggtatgcatcctgcttttggcccgaatgga
ccacctccaccaggaggctttggtcccaattttagacctcctaatggcaacttcggtccg
aatcaacattttaggccaaatcctatgccaccgtttggcccaaatcaaggtccacctttc
aacagcaattttcaaggaacacctaattttcgagtacccaattctggaccatctaatttt
gatcgtcctggtttcggtccaaattttcgaggacaaaatgtcggcagtcaaaatgcaccc
aatcatttcaattccaattttggtaactttggttgtaacaaaaatggacctaatcgtgga
ataaatcgtggacctaacgacaataatatgggaagaaacggatataacaatcgtggcagg
gtacgtgatagtgatcaatcaagaggtacgagaggaagagacaattattga
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integrated database retrieval system
