Vespa velutina (Asian hornet): 124950441
Help
Entry
124950441 CDS
T09814
Name
(RefSeq) helicase SKI2W
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
vve
Vespa velutina (Asian hornet)
Pathway
vve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124950441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vve03019
]
124950441
Enzymes [BR:
vve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124950441
Messenger RNA biogenesis [BR:
vve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124950441
mRNA degradation factors
3'-5' decay
Ski complex
124950441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
Ski2_N
DEAD
Helicase_C
ResIII
DEXQc_Suv3
MTR4_beta-barrel
ATPase_2
Motif
Other DBs
NCBI-GeneID:
124950441
NCBI-ProteinID:
XP_047353083
LinkDB
All DBs
Position
7:8044005..8051239
Genome browser
AA seq
1220 aa
AA seq
DB search
MELPFELPPIWPDIKTELKEYIECPERLPIHQLDHAQCYWPREPDICSLLEFDLAPLSTT
LKFDRDPVTGRVGQMQEVILKGVGENARNSMSMKRIPGSVTDDVRGNTTNIPFLPGGFDE
PIVTDEMTENIDFERNLRTLAKGFSSGIEFEADNCTPKQESINKPTKVSKAKVQVEDDIT
SKINLMALVEQEERELNLWSSVQELKDDDVQESPQIPALEDIPLLPIEPEIPVLNISEEP
SKIIEMEWAEQIDVSVPITDFEKKIPDPAMTFEYELDTFQKQAILKLEENCNVFVAAHTS
AGKTTVAEYAIALTQKHMTRVIYTSPIKALSNQKYRDFKKKFESVGLITGDIQINESASC
LIMTTEILQSMIYGASEVLRDLEFVIFDEVHYINNEDRGHVWEEIVILLPQTVNIVMLSA
TVPKPIIFANWVGRIKKRKMYVISTLKRPIPLQHYLYTPTNDKERGTLVLVLDSNEEFSL
NGWHQATKNIQSVKSLQSKNTNTKDIRKKRFSAKEQMMLWKNFVNYLKHNDKLPVVVFTL
SRKRCDINANRLMNIQLTTLAEKMEVKRFYQHIMKYLKGSDKQLPQVCMMQNLLENGIGV
HHSGILPILKETVEMLFQNGVVKLLFATETFAMGVNMPARTVVFDSITKYDGNGFRTLYP
TEYIQMAGRAGRRGHDITGTVIVICNTEVPHFNELMPMMQGEAKTLESQFKVTYSMVLNL
RRTNELVTVESMMRRSFKESYLILKEDKYQIDLRKVEEKLAALPPLTNIQKKLSGFYEIA
INYLQELRYLKPYMLESKKAINSLTKGRILIISYESHYRNLALLLDVISRKQNGNQYKVL
ILKNTNAQNVNNDRLLENSNNVICKEKSESWYSIISLTKKDIFVPSGVPSHEVITISAWN
ILEITNCQVKVDCGMVLKDWEKRQISRFRHDLPGPTCQTAIQELMAISLNAANDDSILLP
YVTMKVTENLNPRMKHLCKQKQALSSMKCIDILNFEEQFETVFYRNELETERKKLQLSLS
DEGLSLYPDYINMVSLLKHLGYIDSDERIALKGRVALQIGINELLITELILKNVLTVLQP
AEIAALLSALIFHQKSNSESTFPVDFHHLRKEHQIMQNVHAELQNLEQIYNLNTLQPLNF
GLVEVVYEWAQSKSFAEIMQKIDVQEGIIVRCIQQLNETLQDVRNAAVTIGDPVLKEKME
EASTAIKRDIVFAASLYTQD
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggagctaccatttgagcttccacctatctggcctgatataaaaactgaattaaaggag
tatattgaatgccctgaacggcttcccatacatcaacttgatcatgctcaatgttattgg
cccagagaacctgatatttgttctttattagaatttgatttagcaccacttagcacaact
ttaaaatttgatcgtgatccagtaacaggtcgtgttggacaaatgcaagaagttatttta
aaaggagtcggagaaaatgcaagaaattcaatgtctatgaaacgtatacctggatctgtt
acagatgatgttagaggcaatactactaacataccatttttgcctggtggatttgatgaa
cctattgtaacagatgagatgacagaaaatattgattttgagaggaatttaaggacacta
gcaaaaggatttagttctgggatagaatttgaagctgataattgtacgccaaagcaggaa
tcaataaataaaccaactaaagtatcaaaagcaaaagtacaagttgaagatgatataaca
agtaaaataaatttaatggctcttgtagaacaagaagagcgtgagcttaatctctggtca
tctgtgcaagaactaaaagatgatgatgtacaggagtctccacaaatacctgcattagaa
gatattccattgttaccaatagaaccagaaataccagttttaaacatttctgaagaacca
tctaaaattattgaaatggaatgggcagaacaaatagatgtttctgtgccaataacagat
tttgagaagaaaattcctgatccagcaatgacatttgaatatgaattggatactttccaa
aaacaggctatacttaagttagaagagaattgtaatgtttttgttgcagcgcacacttct
gcaggaaaaactactgtagctgagtatgctattgctttaactcagaaacatatgacaagg
gtaatttatacttctcctatcaaagcactatcaaatcaaaaatatcgtgattttaaaaag
aaatttgaaagtgttggtttaataacaggggatattcaaatcaatgagagtgcatcttgt
cttattatgactactgaaatattacaatcaatgatatatggagcatcagaagttcttagg
gatttagaatttgtaatatttgatgaagtacattatattaataatgaggatcggggtcat
gtatgggaagaaatagtgattcttttaccacaaactgtcaatatagttatgctgtcagca
actgtgccaaaaccaataatatttgcaaattgggttggtcgtatcaaaaaacggaaaatg
tacgtaatcagcactttaaagagacctataccattgcaacattatttatatactcctact
aatgacaaggaacgtggcacattagttttagttcttgattcaaatgaagaattttcattg
aatggatggcatcaagcaacaaaaaatattcaatctgttaaaagcctacaaagtaaaaac
actaacacaaaagatattagaaaaaagagattttctgcaaaagagcaaatgatgttatgg
aagaattttgtgaattacttaaaacataatgataaattgcctgttgttgtatttacgttg
tctaggaaacgttgtgatatcaacgcaaacagattaatgaatattcaactaactacatta
gctgaaaaaatggaagtaaaacgcttttaccagcatattatgaaatatttgaaaggtagt
gacaagcaattaccacaagtttgtatgatgcaaaatcttttagaaaacggtattggtgta
catcatagtgggatattgcctattttaaaggaaactgtagagatgcttttccaaaacggt
gttgttaagttattatttgcaactgaaacatttgctatgggagtcaatatgccagcacgg
acagtggtatttgattcaataactaaatatgatggtaatggatttcgtaccttgtatcct
accgaatacatccaaatggctggacgtgctggtcgaagaggtcatgatataactggtaca
gttatagtaatatgtaatacagaagttccacactttaatgaattaatgccaatgatgcaa
ggtgaagcaaaaacattggaatcacaatttaaagtaacatattctatggttttaaatttg
agaagaacaaatgaactagttactgtagaatccatgatgcgcagatcatttaaagagtca
tatctaatattaaaagaagataaataccaaattgatttacgtaaagttgaagaaaaatta
gcagcgttaccaccattgacgaatatacaaaagaaattatctggtttttatgaaattgca
attaattatttacaagaacttcgttatttgaaaccttatatgcttgaatctaaaaaagca
ataaatagtttaactaagggtagaattttaatcatatcatatgaaagtcattatagaaat
ttagctctactattggatgtaatttcacgtaaacaaaatggaaatcaatataaagtattg
atattaaaaaatacaaatgcacaaaatgttaataatgatagattattagaaaattctaat
aatgtaatctgtaaagaaaaatctgaaagttggtatagcattatcagtctaaccaaaaaa
gatatatttgtaccaagtggggttccatcacatgaagttataacgatttctgcatggaat
atactagaaataacaaattgtcaagttaaggttgattgtggtatggtactgaaagattgg
gaaaaaagacaaatatcaagatttaggcatgatctacctggtccaacttgtcaaacagcc
attcaagaattaatggcaatatctttaaatgctgctaatgatgatagtatattattacct
tacgttacaatgaaagtaactgaaaacttaaatcccagaatgaaacatttatgcaaacag
aaacaagctcttagcagcatgaaatgtattgatattcttaactttgaagaacaatttgaa
actgtattttatcgaaatgaattggaaacagaacggaaaaaacttcaacttagtcttagt
gatgaaggattatctttatatccagattatataaatatggtttcacttcttaaacatcta
ggatatatagatagtgatgaaagaattgctttaaaaggcagagttgcattgcaaatagga
attaacgagttactcataacagagctaattttaaaaaatgttttaactgttttacaacca
gctgaaattgctgcactattatctgctttgatatttcatcaaaagtcaaattctgaatcg
acatttccagttgattttcatcacttgagaaaggaacatcaaattatgcagaatgtacat
gccgagttacaaaacttagaacaaatttataatttgaatacactacaaccattgaatttt
ggtttggttgaagttgtttatgaatgggcacaatcaaaatcatttgctgaaataatgcag
aaaatcgatgtgcaagaaggtattatagttagatgcattcaacaacttaatgaaaccttg
caagatgtgagaaatgcagctgtgacaattggtgatccagttttaaaagaaaaaatggaa
gaagcatccacagcaataaaacgtgacatagtttttgctgcgtccttatacactcaagat
taa
DBGET
integrated database retrieval system
