Vespa velutina (Asian hornet): 124950558
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Entry
124950558 CDS
T09814
Name
(RefSeq) 3'-5' RNA helicase YTHDC2-like isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
vve
Vespa velutina (Asian hornet)
Brite
KEGG Orthology (KO) [BR:
vve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vve03041
]
124950558
Enzymes [BR:
vve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124950558
Spliceosome [BR:
vve03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124950558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HA2_C
OB_NTP_bind
R3H
Helicase_C
DEAD
Ank_2
nSTAND3
AAA_19
AAA_22
HA2_N
Ank
PhoH
Ank_5
UvrA_inter
ATPase
T2SSE
AAA_14
AAA_7
AAA_16
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
124950558
NCBI-ProteinID:
XP_047353381
LinkDB
All DBs
Position
7:complement(1626730..1634599)
Genome browser
AA seq
1154 aa
AA seq
DB search
MPRHKQRKHPLIGEDTRIAVNLTLKKLLETPDQKELEFPSSYTAIERAYIHELVKDLGLK
SKSRGKGKNRFLTVYKREGSTIVQADAVIKLQKSSKQSIYALLNNFPLNHKECQDLLPPM
ERERPLNADVITNTKAMGRLNSSIPQVPQLKTNFDVLNFRKSLPIFNAREDILNALANNQ
VVIIAGETGSGKTTQVPQYILEHCQQRHQICRIICTQPRRLSAVSVAERVAFERDEKIGQ
TFGYQIRLESRVAPKTLLTYCTNGVLLRTLMGGDSALTTVTHIIVDEVHERDRFCDFLLI
ALKDAMNKYRSLKIVLMSATLDTTIFAKYFDKCVVINIPGRLYEVETYFLEDVLKMTGYM
TKEMIRRKKEFLNKKEQCKVLESWTQYKPQISGKGPLNERCLLPAPILAQQNEPIPEKVK
LEPWLIEEVDKSISDAWLCGGEDNFAQLLHFILSENVSVDYQHSKTLVTPLMVAAGRGCI
NTTEQLLNLGANLNLRAGNEWTALDWAKNMKQIECAELIEAYMKTYDCAVQDCEIVQGDN
VSISEEDKMLLDVYHHTFNDENIDHDLLLHLVIYIHLKMPPGSLLIFLPGYDDIVTMRER
INGEEKKMNQGLRYNLFVLHSNMQICDQKKVFKPSMQGTRKIILSTNIAETSITIDDVVY
VIDSGKIKEKSFDAISGVCTLRSNWISQACAKQRKGRAGRCGKGFCYRLFSSIRFSSMQL
HQTPEILRLPLQELCLFTKHLAPGNTPIAEFLDRALEPPSNIVTRNAVQLLKTIDALDPW
EDLTELGSHLLDIPIEPRLGKMLLYAVVLKCLDPILTIVCSLAYKDPFILPAQPSQKRAV
AAARKKFATGTFSDHMAVLRAFQGWQNARASGKERSFCEKNFISAPVMEMVVGMRTQLLG
QLRASGFVRARGAGDIRDLNTNSENWAVVKAALTAGLYPNIIRVDRDHMQLRTQKEVKVF
FHPSSTLRDFPKSPRMTYAQTHAANVESLPSDWLLYEEMSRTGRFCHVKIVTLVNPLTVA
LFSGPARLPMDTIYEAGAIPESESDSEVDENHEGTIFKLDDWIVFKLDLETVQLFLNLRQ
KWNALFLRRMKAPGKPMSQLDEKVVSTLVTVLTNEEQACGLQQPSGIGQRPRPLIVDYYP
ANARRADDFVERNF
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgccacaaacaacgaaaacatccactgataggagaagacactagaatagcagta
aacttaactttgaagaaattattggaaacaccggatcaaaaagaattagaatttccatct
tcttatacagcaatagaacgagcttatatccatgaacttgttaaggatcttggcttaaaa
tccaaaagtagaggtaaaggcaaaaaccgatttttaacggtatacaagagagaaggatct
accatagttcaagctgatgctgtaatcaagctgcaaaagtcatcgaaacaaagtatttat
gctttattaaataatttcccattgaatcataaagaatgtcaagatttattacctccaatg
gaaagagaacggcctcttaatgcagatgttattacaaatacaaaggctatgggtcgcttg
aacagtagcatcccacaagtaccacaattaaagacaaattttgatgtattgaattttcgt
aaatcacttccaatttttaatgcacgagaggacattttaaatgctttggctaacaatcaa
gtagtgataatagctggggaaacaggaagtggtaaaaccacacaagtacctcaatatata
ttagagcattgccagcaaagacatcaaatttgtaggattatatgtactcaaccaaggaga
ctttctgcagtatccgttgcagaaagagtagcatttgaaagggacgaaaaaattggacaa
acatttggttatcaaattagacttgaaagtagagttgcgcctaaaactcttttgacatat
tgtactaatggggttcttcttaggactcttatgggtggagattctgccttgactacagtc
acgcacataatagtggatgaagttcacgaacgtgatagattttgtgacttccttttgata
gcattaaaagatgcaatgaataaatatagatcattgaaaattgtgttaatgagtgctaca
ttagatactactatttttgcaaagtactttgataaatgtgttgttatcaatattcctggt
agattgtatgaagttgaaacatatttccttgaggatgttttgaaaatgaccggctatatg
actaaagaaatgattaggagaaaaaaagaatttttaaataaaaaggaacagtgcaaggtc
ttagaatcttggactcagtacaagccacaaatatctggtaaaggcccattgaatgaaaga
tgtttgttgccagcaccgatattagcacaacaaaatgagcctataccagagaaagttaaa
ctggaaccgtggttgatagaggaagtagacaaaagtatatcggacgcatggttatgtggt
ggagaagataattttgcacaattattgcatttcatactttccgaaaatgtttcagtagat
tatcagcattctaagacattagttacaccattgatggttgctgcaggtagaggatgcata
aatactaccgaacagcttttaaatcttggagcaaatttgaatcttcgagctggtaacgag
tggactgcattagattgggcaaaaaatatgaaacaaatcgaatgtgcagaattgattgag
gcatatatgaaaacgtatgattgtgcagtgcaagattgtgaaatagtacaaggtgacaac
gtttctatttctgaagaagataaaatgttattagatgtatatcatcatacattcaatgat
gaaaatattgatcatgatcttcttttacatctcgttatatatatccatttgaaaatgcca
ccaggttcattattaatatttttacctggttatgatgatatagtaactatgagagaaaga
ataaacggcgaagaaaagaaaatgaatcaaggccttcgttacaatttatttgtacttcac
tcaaatatgcaaatatgtgatcagaaaaaagtattcaagcctagtatgcaaggaactaga
aagattattctttctacaaatattgcagaaacaagtattacgatcgatgatgttgtttac
gtgattgattcaggaaaaataaaagaaaaatcattcgacgcgatatccggtgtatgtacg
cttcgttcaaattggatatcacaagcatgtgcaaagcaacgaaaaggaagagctggcaga
tgtggaaaaggattctgttatcgtttattctcatcaattcgttttagcagtatgcaatta
catcaaacacctgaaatcttacgattacccttgcaagagttatgcctttttacaaaacat
ttggcaccaggaaatacaccaattgcagaatttttagacagagctttagagccaccatcc
aatatagtaactagaaatgccgtacaattattgaagacaatcgatgcattggacccatgg
gaagatcttaccgaattaggaagtcatttattagatataccgattgaaccaagattaggg
aaaatgttgttatatgcagttgttttgaaatgtctcgatccaattctaacgatcgtttgc
agcttggcatataaagatccatttattctgccagctcaaccatcacaaaaaagggctgta
gctgctgcacgcaaaaaatttgctaccgggacattttcagatcatatggctgtattgcga
gcatttcagggctggcaaaatgcaagagctagcgggaaggaacgtagtttctgtgaaaaa
aatttcatttcagcgcctgttatggaaatggtagttggaatgcgaactcaacttcttggt
caacttcgtgcatctggatttgttagagcgagaggtgctggtgacattagagatttgaat
accaattctgaaaattgggcggtcgttaaagcagctttaacagctggtttatatccaaat
ataatcagagtcgatcgggatcatatgcaactaagaacgcaaaaagaagtgaaggtcttt
ttccatccatcatcgacgttaagagattttccaaaatctcctagaatgacttatgctcaa
actcatgcagctaatgtagaatcattaccgtccgattggttactctatgaagagatgagt
cgtactggtcggttttgtcatgttaaaatcgttacgctcgttaatcccttgaccgtagca
cttttcagtggtccagcaagattacctatggatactatttatgaagctggtgcaataccc
gaaagcgaatctgattccgaagtggatgaaaatcatgagggtactatttttaagttggac
gattggattgtatttaaacttgatcttgaaactgtacaattgtttttaaatttacgacaa
aaatggaacgccctatttttacggcgtatgaaagcaccaggaaaacctatgtcacaatta
gatgaaaaagttgttagtacattagttacagttctaactaatgaggagcaagcatgtgga
ttgcaacaaccttcaggaattggacaaagacctcgtccattaatagtcgattattatcct
gcaaatgctagaagagcagatgactttgtagagagaaatttttaa
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