Vespa velutina (Asian hornet): 124951404
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Entry
124951404 CDS
T09814
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
vve
Vespa velutina (Asian hornet)
Brite
KEGG Orthology (KO) [BR:
vve00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vve01009
]
124951404
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vve03019
]
124951404
04131 Membrane trafficking [BR:
vve04131
]
124951404
03036 Chromosome and associated proteins [BR:
vve03036
]
124951404
Enzymes [BR:
vve01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
124951404
Protein phosphatases and associated proteins [BR:
vve01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124951404
Messenger RNA biogenesis [BR:
vve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
124951404
Membrane trafficking [BR:
vve04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
124951404
Chromosome and associated proteins [BR:
vve03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
124951404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
STAT_int
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
124951404
NCBI-ProteinID:
XP_047355695
LinkDB
All DBs
Position
9:5703954..5710533
Genome browser
AA seq
1155 aa
AA seq
DB search
MSKTGLEGNLFDAVRQLAESEIQLIKVIEESTMDCQRNTTDMKSTTKKKNTKKSSKLSNI
RPSAALLAAKQEAVQRKILQNKKSNTNFVYDIYQKIRDAYSIVHKETGIVYDHSMEEHKC
LWDENYPECPNRLIRILERCKELELLNRCKLISTKFCTENDILQMHSQKQIDILKSTSGC
MDLDKLETLSSKYDAIYIHPSTYKLSLLAVSSTISLVESICKGDIQNGMAIIRPPGHHAM
KSEYCGYCFYNNVAIAAKKALNDNLANKILIVDWDVHHGQATQQMFYDDSRVVYFSIHRY
ENGTFWPNLEESDFHYIGKGLGEGYNFNIPLNKTGMTNADYIAIFQQVLLPMAYEFQPDL
IIVSAGYDAALGCPEGEMEITPACYAHLLSSLLSLAAGKVAVVLEGGYCLKSLAESAALT
LRTLLGDPCPMLQTLQLPSLSIRDTILNTIYVHKQFWKCYQYQEQYSINNRIDRKEENND
QHLPVVNYKGEVYKPDIYETRNCYPVQSKNTLEALDKKLNSLIKFTNLSKAPNKVCIVYD
NRMLKHCDTINNTHPEKPNRILSIYKKHEEHGLLERCYLQQGRVATEEEILLAHSQDYIH
AIKKTETFKTKDLERQALKYNSVYLHNETWFSACVSVGSLLQIVDNVLNGQAQSGVAVIR
PPGHHAEPNLACGFCIFNNVAVAAKYALNIHNVKRILIVDWDVHHGNGTQSIFENDPNVL
YISIHRYDNGSFFPHSKYGNYTSVGSGLGEGYCINIPWNKKGMGNAEYIAAFQQVVMPIA
YQFNPELVLVSAGFDACIGDPLGGCTVTPEMYGHLTHWLSSLANGRIILSLEGGYNINSI
SHSMAICTKALLGDPLPLLDASLIPCSSAIHSINNVLKTQKKYWPNLMFNLSLPKENLTK
IATYKKMNEQVRNSKFNEHSESKIALEGIENEKLDIKLSFNKNSMNLVTDEEILKLQNEI
ENIKIKNSKTMKELTTTEIARTCVNKDQQKERQRRETAGSSNNASSSNDFGENRGIYDGA
AATSLTDYLSDNLQALIAGEMFAVIPLRDCPHLDTVNDVPSRGIDVHLPCMECGSNVENW
ICLQCYTVHCARNINQHALLHADETQHPLTLSFSDLSVWCYGCEAYIDNPRLYAARNAAH
QSKFNQDSPWTYEGQ
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaactggactagagggaaatttgtttgatgctgtgaggcaactagcagagagt
gaaattcaacttattaaagttattgaggaatctaccatggattgtcaaagaaatactacg
gatatgaaatctacaacaaaaaaaaagaataccaagaaatcatctaaactttcaaatatt
cgaccgtctgccgctttattggcagccaaacaagaggcagtacagcgcaaaattttacaa
aataaaaagtctaacacaaactttgtatacgacatttatcaaaagataagagatgcatat
agtattgtgcataaggaaactggtattgtttatgatcattctatggaggaacataaatgt
ttgtgggatgaaaattatcctgaatgtccaaatagattaataaggatcttagaaagatgt
aaagagttagaattgttgaatagatgtaaattaatttcaaccaaattttgtacagaaaat
gacatacttcaaatgcacagtcaaaaacaaatagatatattaaaatcaaccagtggatgt
atggatttggacaaattggaaacattgtcttctaaatatgatgctatatatatacatcca
tccacttataaattatctttattggctgtgagttcaacaataagtttagtagaaagtatt
tgtaaaggagatatacaaaatggcatggccattatcagaccacctggacatcatgcaatg
aaatctgaatattgtggatattgtttttataataacgtggctattgcggcaaaaaaagct
ttaaatgataatttagcaaataaaattcttattgttgattgggatgtacatcatggacaa
gctactcaacaaatgttttatgatgattcacgtgtagtttatttttcaatacatcgttat
gaaaatggaacattctggcctaatttagaagaatctgattttcattacattggtaaaggt
ttgggagaaggttataattttaatataccacttaacaaaactggtatgacaaatgctgat
tatattgcaatatttcaacaagttttattaccaatggcttatgagtttcaacctgatctc
ataatagtctcagctggttatgatgcagcattgggatgcccagagggtgaaatggaaata
acacctgcatgttatgctcatctattgtcatctctattgagtttggcagctggaaaggta
gctgtagtattggagggtggttattgtttaaagtcattggctgaaagtgctgcactaact
ctgcgaacattattaggtgatccatgtcctatgttgcaaacattacaattaccatcatta
agtatacgcgacacgattttaaatactatctacgttcataaacagttttggaaatgttat
caatatcaagaacaatatagtattaataatagaattgacagaaaagaagaaaataatgat
caacatttgcctgttgttaattacaagggagaagtgtataagccagatatttatgaaaca
agaaattgttatcctgtacaaagtaaaaatactcttgaagcattagataaaaaattaaat
tcattaataaaatttacaaatttatccaaagcacctaacaaagtatgtattgtatatgac
aacaggatgttgaaacattgcgatactattaataacacacatccagaaaagccaaatcga
attttaagcatttataaaaaacatgaagaacatggtttattagagcggtgctatttacaa
caaggaagagtggcaacagaggaagaaatattattagctcattcacaagactacattcat
gcaataaaaaagacagaaacatttaaaaccaaagatttggaaaggcaagcattaaaatat
aattctgtttatttgcataatgaaacatggttttccgcttgtgtatctgttggttcatta
cttcaaattgtggacaatgtattaaatggacaagcacaatctggagttgcagtaataaga
cctccaggacatcatgcagaaccaaatctagcatgtggtttttgtatttttaataatgtt
gcagtagcagcaaaatatgctctaaatattcataatgtaaagaggatattaatagtagat
tgggatgtacatcatggaaatggaactcaatctatttttgaaaatgatccaaatgtactt
tatatatccattcatcgttatgacaatggaagttttttcccacattctaaatacggcaat
tatacttctgttgggtcagggttaggagaaggttattgtataaatataccatggaacaaa
aaaggaatgggaaatgcagaatatatagctgcatttcaacaagttgttatgccaattgct
tatcaattcaatccagaattagttctagtctctgcaggctttgatgcttgtattggagat
ccactagggggatgtacagtgactccagaaatgtatggacatttaacacattggttatct
tctttggcaaatggacgtattatccttagtctggagggaggttataatataaattcaatt
tctcattcaatggcgatatgtacaaaagcgttacttggtgacccattacccttgctagat
gcttcgttaataccatgttcaagtgcaatacattctataaataatgtgttaaaaacacaa
aagaaatattggcccaatttaatgttcaatttatcattgccaaaagaaaatctcacgaaa
attgctacttataagaaaatgaatgagcaagttagaaattctaaatttaatgaacattca
gaatccaaaattgctttagaaggcattgaaaatgaaaaattggatatcaaactttccttt
aataaaaatagtatgaatttagtaacggatgaagagatattgaaacttcaaaatgagata
gaaaatataaaaattaagaattcaaaaactatgaaagaattgacaactacagaaatagct
agaacatgtgtaaataaggatcaacaaaaagaaagacagagaagagagactgcaggaagt
tctaataatgcaagtagtagtaatgattttggagagaatagaggaatttatgatggagct
gcagcaacaagtttgaccgattatctctctgataatctgcaggcattaatagctggagaa
atgtttgctgttataccattgcgcgattgtccacatctagatactgttaatgatgtacca
tctcgtggtattgatgtacatttaccatgtatggaatgtggtagcaatgttgaaaattgg
atttgtttacaatgttacaccgtacattgtgcaagaaatatcaaccaacatgcattatta
catgctgatgaaactcaacatcctttgactctaagttttagtgatttatcagtttggtgt
tacggatgtgaagcttatattgacaatccgagattatatgcggctcggaatgcagcacat
caaagtaaatttaatcaagattcaccatggacttatgagggacaatga
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integrated database retrieval system
