Vespa velutina (Asian hornet): 124951534
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Entry
124951534 CDS
T09814
Name
(RefSeq) exosome complex exonuclease RRP42-like isoform X1
KO
K12589
exosome complex component RRP42
Organism
vve
Vespa velutina (Asian hornet)
Pathway
vve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124951534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vve03019
]
124951534
Messenger RNA biogenesis [BR:
vve03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124951534
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
124951534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
124951534
NCBI-ProteinID:
XP_047356019
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All DBs
Position
9:complement(3739774..3742384)
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AA seq
291 aa
AA seq
DB search
MAEVPLSLGEKTFILHGVDADFRNDGRKRYEYRSFEIETNLMQQTHGSSRLRIGNTDILV
GVKVEIDSPYIDRPCEGKLEFFVDCSANATPEFEGKGGDDLAMEISNILSLSYQTPGAFN
LKDLCILPYKKCWKMFVDILILQCGGNLFDAVGIAVKAALYSTEIPRVTAASLDGGEADI
QISDDPFDCIKLDITNYPVIVTLCKIGENCVIDPTSEEEMCSPASTIISIMPNGNITSIV
KIGYGSMQDTILLKMLEMGKTIALALNDALMNALKKETELGPTKPIVGFLR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagttccattgagcttaggagaaaaaacgtttattcttcatggagttgatgca
gattttagaaatgatggaagaaaaagatatgaatatcgatcattcgaaattgaaaccaat
ttgatgcaacaaacgcatggttcatcaagattacgaataggaaatactgacattttagtt
ggtgttaaagtagaaattgattcaccatatattgatcgaccatgtgaaggaaaattagaa
ttttttgtagattgttcagccaatgctaccccagaatttgaaggtaaaggtggagatgat
ctagcaatggaaataagtaacattttgtcattatcttatcaaactccaggtgcatttaac
ttaaaagatttatgtattttaccatataaaaaatgttggaaaatgtttgttgatattttg
atattacaatgtggagggaatctttttgatgctgtaggtatagctgtaaaagctgcttta
tatagtacagaaataccaagagtaactgctgcatctcttgatggtggagaagcagatata
caaatatcagatgatccttttgattgtatcaaattagatattacaaattatccagttatt
gtcactttgtgtaaaataggagaaaattgtgtaatagatcctacttcagaagaagaaatg
tgtagtccagcaagtacaattatatctataatgccaaatggtaatataacatcaattgtc
aaaataggatatggtagtatgcaagatactatattacttaaaatgctagagatgggtaaa
actattgcacttgcattaaatgatgctcttatgaatgcattaaagaaagaaacagaactt
ggaccaacgaaacctatagttggatttctcagatga
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