Vespa velutina (Asian hornet): 124953278
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Entry
124953278 CDS
T09814
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
vve
Vespa velutina (Asian hornet)
Pathway
vve03030
DNA replication
vve03420
Nucleotide excision repair
vve03430
Mismatch repair
vve03440
Homologous recombination
vve03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124953278
03420 Nucleotide excision repair
124953278
03430 Mismatch repair
124953278
03440 Homologous recombination
124953278
03460 Fanconi anemia pathway
124953278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vve03000
]
124953278
03032 DNA replication proteins [BR:
vve03032
]
124953278
03400 DNA repair and recombination proteins [BR:
vve03400
]
124953278
Transcription factors [BR:
vve03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124953278
DNA replication proteins [BR:
vve03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
124953278
DNA repair and recombination proteins [BR:
vve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
124953278
MMR (mismatch excision repair)
124953278
DSBR (double strand breaks repair)
HR (homologous recombination)
124953278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
UPF0167
IBR
zf_UBZ
zf-AN1
Motif
Other DBs
NCBI-GeneID:
124953278
NCBI-ProteinID:
XP_047360365
LinkDB
All DBs
Position
12:3557214..3560575
Genome browser
AA seq
593 aa
AA seq
DB search
MIPLTEGSLDKIMAGIDVEKPILQILGHKKLASSSSGDRYRLLVSDGKRVNSFTMLATQL
NSMITDNILTEFSICQVNRYAVSTVNNGGKQKRVMVILSLDLKVSGEEVGSKIGNPTNID
SNANTEAESKKPQSIQTPSAVTIQKNTVNHSSSDINTTPIVGLSPYQNKWVIKARITNKS
NIITWSNSRGEGKLFSMDLVDESGEIRCTAFRDQCDKFYDMIEVGKIYYISRCNLKPANK
NYSTLKNDYEMSMTQDTEIILCHDDVDDIPMIQFDFVPINTIENKEKNDIIDVLGIAKSC
EEIQTLRARTTGRELKKRDVMLVDESNTMVCLSLWGADAEKFDGNNNPVVAIRGARIGEF
NGGKNLSAVMSSVIQIDPDIPEAHKLRGWYNTIGMSDQAKSLSTNNARGGGMNGTWLTIK
EAQNITSSSENGFNIFISKLTVNLIKAENVVYKSCPVDGCNKKMIDQANGMYRCEKCNKE
FPSFKYRLLANVNFGDWQNNQWVTAFNDEAEKLLNVTAQELGELQENNKDAYMDKFSEVA
FQSFIVKLRMKIETFNDETRLKASCLSISPIDYKVYNDILLTKLKDIIGIEKL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgattcctttaacagaaggatcattagataaaatcatggcaggcattgatgttgaaaaa
ccaatcctacaaatattgggtcataaaaagttagcaagctccagtagtggagatcgttat
agattattagtttctgatggcaaaagagtaaattcttttacaatgttagctacacaatta
aattcgatgataacggataatattttgactgaattttcaatatgtcaagttaatagatat
gctgtaagtactgtcaataatggtggaaaacaaaaacgtgtgatggtgatattgagtctt
gatttaaaagtatctggtgaagaagttggttccaaaataggaaatcccacaaatattgat
agcaatgcaaacacagaagctgaatcaaaaaaaccacaatctatacaaacccccagtgcc
gttactattcaaaagaatactgtaaatcattcatcttctgatataaatacaactcctatt
gttggattaagtccgtatcaaaataaatgggttattaaagcaagaataacaaataaatct
aatattattacatggtctaattctcggggtgaaggaaaattattttcaatggatttagtt
gatgaaagcggtgagataaggtgtacagcattcagagatcagtgtgataaattttatgat
atgatagaggttggaaaaatttattatatttcacgatgtaatttaaaaccagcaaataaa
aattacagtactttgaagaatgattatgaaatgagtatgactcaagatacagaaattatt
ctatgccacgatgatgtggatgatattccaatgattcagtttgattttgtaccaataaat
actatagaaaataaagaaaagaatgatattatagatgttttgggaattgcaaaatcttgt
gaagaaatacagactctaagagcaagaaccacaggcagggaacttaaaaagagagatgtt
atgttggtagatgaaagtaataccatggtatgtttgagtttgtggggtgcagatgctgaa
aagtttgatggaaataataatcctgttgtggctattagaggtgcacgtattggtgaattt
aatggtggaaaaaatctttccgctgtaatgtcttctgttattcaaatagatcctgacata
ccagaagctcacaaattacgtgggtggtataatactataggaatgtctgatcaagctaaa
agtttatctacgaataatgcacgtggaggtggtatgaatggaacatggttaactataaaa
gaagcacaaaatataacaagctccagtgaaaatggtttcaatattttcatttcaaaactt
actgttaatttgattaaagccgaaaatgttgtttataaatcatgtccggttgatggctgt
aataagaaaatgatagatcaagctaatggaatgtacagatgtgaaaaatgtaacaaagaa
tttccaagttttaagtaccgcctccttgcgaatgtcaattttggagattggcaaaataat
caatgggtaacagccttcaatgatgaagctgagaaattattaaatgtaactgcacaagaa
ttgggtgaattacaagagaataataaagatgcatacatggacaagttttctgaagttgca
tttcaaagtttcattgtgaaactacgtatgaaaatagaaacattcaatgatgaaacaaga
ttaaaagcaagctgtttatcgatatcaccaattgattacaaagtatataatgatatcttg
ttaacaaaacttaaagatatcattgggattgaaaagctttaa
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