Vespa velutina (Asian hornet): 124954010
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Entry
124954010 CDS
T09814
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
vve
Vespa velutina (Asian hornet)
Pathway
vve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124954010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vve03041
]
124954010
Enzymes [BR:
vve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124954010
Spliceosome [BR:
vve03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
124954010
Complex C
U4/U6.U5 tri-SnRNP related factors
124954010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
AAA_30
Cas3-like_C_2
SLFN-g3_helicase
Flavi_DEAD
T2SSE
ATPase
Motif
Other DBs
NCBI-GeneID:
124954010
NCBI-ProteinID:
XP_047362147
LinkDB
All DBs
Position
14:4792856..4796929
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AA seq
886 aa
AA seq
DB search
MSKYRRQETSSEDSDSEEERRKKDIKERDEFANRLKAKDDSKTRKVAMPTGSGAAEAAKR
LKLMETDAREKLVPKLRVDSRRKYLEKRKEDKVAELEADIIDDEYLFEEEILTEREKRER
AHKKQLLQLAKEHEKARELERVQRYHMPLEKKKLEAEAEPHDTEPPQSEQSKWESDQMSS
AVFRFGAKDRKAQQDYDLLLEDEIEFIQALRMPGSEKGTKRESSPSPQAKILQTIQETKK
SLPIYPFKNDLIQAIKEHQILIIEGETGSGKTTQIPQYLYESGFAVNDKIIGCSEPRRVA
AMSVAARVAHEMAVKLGNEVGYAIRFEDCTSHRTRIKYMTDGTLHREFLSQPDLASYSVM
IIDEAHERTLHTDILFGLVKDITRFRSDLKLLISSATLDATKFSEFFDDAPIFRIPGRRF
PVDIYYTKAPEADYIDACVVSILQIHATQPPGDVLVFLTGQDEIETCQEMLQERVRRLGS
KLAELLILPVYANLPSDMQAKIFQPTPPGARKVVLATNIAETSLTIDNIVYVIDPGFAKQ
NNFNSRTGMESLMVVPISKASAMQRAGRAGRVAPGKCFRLYTAWAYQHELEDNTVPEIQR
INLGNAVLTLKALGINDLVHFDFLDPPPHETLVLALEQLYALGALNHRGELTKLGRRMAE
FPLDPMMAKMLLASERYRCSEEVATIAAMLSVNGAIFYRPKDKIIHADTARKNFHVPGGD
HLTLLNVYNQWQQSDFSTHWCYENFIQHRSMKRARDVREQLIGLMQRVEMELVSGITETV
NIRKAITAGYFYHVARLSKGGHYKTAKHNQTVSIHPNSSLFQELPRWLLYHELVFTTKEF
MRQVTEIESKWLLEVAPHYYKPKELEDSTNKKMPKVAGRARPDATT
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatacagaaggcaagaaacctcaagcgaggatagtgatagtgaggaagaaagg
cgtaagaaagatataaaagagagagatgaatttgcgaaccgtctcaaagcaaaagatgat
agtaagacacgaaaagttgctatgcccactggctctggagcagctgaggcagcaaaaagg
cttaaactcatggaaactgatgcaagagaaaagcttgttccaaaattaagagtggactcc
cgtagaaaatatttagaaaaacgtaaagaggataaagtggccgaattagaagcagatatt
attgacgatgaatacctgtttgaagaagaaatcttaacggaacgtgaaaagcgtgaaagg
gcacataagaaacaattattacaattggcaaaggaacatgaaaaggcaagggaacttgaa
agagtacaaagatatcatatgcctttggaaaaaaagaaattagaagctgaggcagaacca
catgacacagaaccacctcaatctgaacaaagtaaatgggagtccgatcagatgtcatct
gctgtatttagatttggggcaaaagacagaaaagcacaacaggattatgatcttttattg
gaggatgaaatagaatttattcaagcactgcgtatgcctggaagtgaaaaaggtacaaag
cgtgaatcaagtccttctccgcaggctaaaattttacaaaccatacaagaaacaaaaaag
agcttaccaatatatccatttaagaatgatcttattcaagctattaaagagcatcagatt
ctgatcatagaaggtgaaacgggttcaggaaaaactacacaaattccacaatatttatat
gaatcgggttttgcggtgaatgacaaaattattggttgtagcgagcctcgcagagtggca
gcgatgtctgtagccgctagagtggctcatgaaatggctgtaaaacttggaaacgaagtt
ggttatgcaattcgcttcgaagattgcacgtcccatcgtacgcgcataaaatacatgact
gatggcacattacatcgtgaattccttagtcaacctgatttagcgtcgtatagcgtaatg
ataattgacgaagcacatgagcgcacattgcataccgacattttatttggcttggtcaag
gatattacaagatttcgttcagacttgaaattattaatttcttctgcaacgttagatgca
acaaagtttagcgaattcttcgacgatgctccaatttttcgtatacctggccgtcgtttt
cctgtagatatatattatacaaaagcacctgaggcggattatatcgatgcatgtgtagtc
tctattcttcaaattcatgcgacccaaccgcctggagatgtgctagtatttctaactggt
caggacgagattgagacgtgtcaagagatgttacaagagagagtaagaaggctgggaagt
aagttggcggaacttttgatattacctgtttatgcgaacttgccaagtgatatgcaagct
aaaatatttcaacccactccacccggcgctagaaaggttgttctggctactaacatagca
gagacgtctttaaccattgacaatatcgtttacgtaatagatcctggatttgcgaagcag
aataattttaattcgcgaacaggaatggaaagtttgatggttgttccgattagtaaagct
tctgcgatgcagcgagcgggtcgtgctggcagagtagcacctggtaaatgtttcagactt
tacacagcatgggcatatcagcacgagttggaggataatactgtacctgaaatacaaagg
ataaatcttggtaatgcagtgctcacattaaaagccctaggtattaacgatttagttcac
tttgattttctcgatccaccgccgcatgaaacattagtattagctttagagcaactttat
gctttgggtgctctcaatcatcgcggtgaattaactaaactcggccgacgaatggcagaa
tttccacttgatccaatgatggcaaaaatgttgttagccagcgaacgttatcgttgttcc
gaagaggtggccacaatagctgcaatgctttctgttaacggagcaattttctatagacct
aaagataaaattatacatgcggatacagctcgaaaaaattttcatgtacctggtggagat
catctcactcttctaaatgtttataatcagtggcaacaaagcgattttagtactcattgg
tgttacgaaaattttattcagcatagatcgatgaaacgagccagagatgttagggaacag
ttaatcggcttgatgcaacgtgttgaaatggaacttgtctcgggtattacagaaaccgtt
aatattcgaaaggcaattacggcaggttatttctatcacgtagctcgtttgtcaaaggga
ggccattataaaacagcaaaacataatcaaactgtatcgattcatccgaatagttcttta
tttcaagaacttccgcgatggttactttatcacgaattagtatttacaacgaaagaattc
atgcgacaggttacggaaatagaaagcaaatggttgttggaagttgcaccacattattac
aaacccaaagaacttgaagactcgacgaataaaaaaatgcctaaagttgcaggcagagca
cgaccagatgcaactacctaa
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