Vespa velutina (Asian hornet): 124954092
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Entry
124954092 CDS
T09814
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog isoform X1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
vve
Vespa velutina (Asian hornet)
Pathway
vve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124954092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vve03019
]
124954092
03041 Spliceosome [BR:
vve03041
]
124954092
Messenger RNA biogenesis [BR:
vve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124954092
Spliceosome [BR:
vve03041
]
Complex B
Other components
Prp19-related factors
124954092
Complex C
124954092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_8
TPR_2
TPR_15
TPR_12
ARM_TT21_C
PPR
NRDE-2
Mad3_BUB1_I
DHR-2_Lobe_A
TPR_10
Microp_apicomplexa_6
ATG1-like_MIT2
SNAP
Motif
Other DBs
NCBI-GeneID:
124954092
NCBI-ProteinID:
XP_047362416
LinkDB
All DBs
Position
14:complement(4889460..4893767)
Genome browser
AA seq
848 aa
AA seq
DB search
MIERKDTEGNLYTFYDEDLPYEEEILRNPYSVKHWQRYIDHLKNTKSNNLNMVYERALTE
LPGSYKLWYNYLRHRLSQLKKRCITDPLYEDVNNAFERALVFMHKMPRIWMDYCMLMTKQ
CYITRTRQVFDRSLRALPITQHHRIWPLYIDFLKKHNVYETSVRVFRRYLKLAPEDTEEY
IEYLISIGRLDEAAIKLAQIVNQDDFVSKHGKSNHQLWNELCNLISKNPSKIKSLNVDAI
IRGGLRRYTDQLGPLWNSLADYYVRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFE
ELSLSKCIEDETVISTEEGNLELELRLARFEHLMERRLLLLNSVLLRQNPHNVQEWHKRV
KLYEGQPHEIINTYTEAVQTVQPQLAVGKLHTLWVAFGKFYEENSQIADARVIFERATHV
PYTKVDDLASVWCEWAEMEIRHGNCKEALKLMHRATAMPFRKVSYHDENETVQMRLYKSL
KVWSMYADLEESFGTFKTCKAVYDKIIDLKIATPQIIINYGLFLEENNYFEEAFRAYEKG
IALFKWPNVYDVWNTYLTKFLKRYGGTKLERTRDLFEQCLEHCPNKYAKALYLLYAKLEE
EHGLARHAMSVYERATSAVLPEERFEMFNIYIKKAADIYGVPKTRQIYEKAIEVLNDENT
REMCLRFAEMETKLGEVDRARAIYAHCSQICDPRVSSNFWKVWKEFEVQHGNEDTMREML
RIKRSVQAMYNTQVNMMSAQMLNNVSNQVSGVQIDSMRALDNKTSDTTTQSGLKDTIKFV
RGITETDGKESSRVNNPDEIDIDMDMDDDNENEGEEEIEEEMSIEKQVIPSQVFGSLKTT
DNDTNEDE
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgatagaacgaaaagatactgaaggaaatttatatactttttacgatgaagatttacct
tatgaagaggaaatcttacgaaatccatattccgtaaaacattggcagcgttatatcgat
catttgaaaaatacaaaaagtaataatttaaatatggtttatgaacgtgccttgacagaa
ctccctggaagttacaaattatggtataattatcttcgacaccgattaagccaattaaaa
aaaagatgtataacagatcctctttatgaagatgtaaataatgcatttgaaagagctttg
gtatttatgcataaaatgccacgtatttggatggattattgcatgctaatgacaaaacaa
tgctacataacgcgtactcgtcaagtatttgatcgttctcttagagcacttccaattaca
cagcatcatcgtatatggccactttacatagactttttgaagaaacacaatgtttacgaa
acatctgtaagagtattcaggcgatatttgaagttggcacctgaggacacagaggaatat
attgaatatttaatatctattggaaggcttgatgaagcagctataaaacttgcacaaatt
gttaatcaggatgattttgtatcaaaacatggaaaatctaatcatcaattgtggaatgaa
ttgtgcaatttgatatcaaaaaatccttctaaaataaaatctcttaacgtagatgccatt
ataagaggtggtttaaggagatacaccgatcagttaggtccattatggaactcattagct
gattattatgttcgcagtggtctctttgagagggcaagagatatttatgaagaagctata
caaacagtaactactgttagagactttacgcaagtctttgatgcatatgcacaatttgaa
gaattaagtcttagtaaatgtatagaagatgaaaccgttatttcaacagaggagggtaat
ttagaattggagttacgtctagcaagatttgaacatcttatggaaaggagattgttatta
cttaattcggtattattaagacaaaatcctcataacgtacaggagtggcataagagagta
aaactttatgaaggacagccgcacgagataattaatacatatacggaagcagtacaaact
gtacaaccacaattagcagtaggcaagttacatactttgtgggttgcatttggcaagttt
tatgaagaaaatagtcaaatagcagatgccagagttatatttgaaagagctactcatgtc
ccctatactaaggtagatgatctagcatcagtatggtgtgaatgggcagaaatggagatc
agacatgggaattgtaaagaggctttaaaacttatgcatcgtgctacggccatgccgttc
cgtaaagtttcatatcacgatgaaaatgaaactgttcaaatgagattgtataaatcttta
aaagtgtggtcaatgtatgcagatttagaagaaagttttggtacattcaagacatgcaag
gcagtatatgataaaataatagatttaaaaatagcaacacctcaaatcattattaactat
ggattgttcttggaagagaataattacttcgaggaagcttttagggcatatgaaaaagga
atcgcgctctttaaatggcctaatgtatatgatgtatggaatacatatctcaccaaattt
ttaaaacgttatggtggaacaaagttggaacgtacacgtgatttattcgagcaatgttta
gaacactgtccaaataaatacgctaaagcgttatatttattgtatgcaaaattggaagaa
gagcatggtttggctaggcacgcaatgtccgtatatgaacgagcgactagtgcagtttta
cccgaagaaagattcgaaatgtttaacatatatataaagaaagcagcagatatttatggt
gtgccaaaaactagacaaatatacgaaaaggctattgaagttttgaatgatgaaaataca
agagaaatgtgtttaagatttgctgaaatggaaacaaaattaggagaagtagatagggca
agagctatttatgcacattgtagtcaaatatgtgatcctagagtatcatcgaacttttgg
aaagtgtggaaggaatttgaagtacagcatggaaatgaagatacgatgcgtgaaatgctt
agaattaaacgtagtgtgcaagccatgtataacacccaagtgaatatgatgtctgctcaa
atgttgaataatgtatctaatcaagtgtctggtgtacaaattgatagtatgcgtgcgcta
gataataaaacctctgacacaactactcaatctggattgaaggatactattaaatttgta
cgtggtataacagaaacagatggaaaagaatcatcacgtgtaaataatccagatgaaatt
gatattgatatggatatggatgatgataatgaaaatgaaggagaagaagagattgaagaa
gaaatgtctattgaaaaacaagtcattccatcgcaagtatttggtagcttaaaaacaaca
gacaatgacacaaacgaagatgagtga
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