Vespa velutina (Asian hornet): 124954135
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Entry
124954135 CDS
T09814
Name
(RefSeq) regulator of nonsense transcripts 1
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
vve
Vespa velutina (Asian hornet)
Pathway
vve03013
Nucleocytoplasmic transport
vve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vve00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124954135
03015 mRNA surveillance pathway
124954135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vve03019
]
124954135
Enzymes [BR:
vve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
124954135
5.6.2.5 RNA 5'-3' helicase
124954135
Messenger RNA biogenesis [BR:
vve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
124954135
mRNA cycle factors
Common to processing body (P body) and stress granule
124954135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
SLFN-g3_helicase
UvrD-helicase
Helicase_RecD
DEAD
ATPase
NPHP3_N
SRP54
nSTAND3
AAA_22
AAA_16
AAA_10
AAA
AAA_32
Motif
Other DBs
NCBI-GeneID:
124954135
NCBI-ProteinID:
XP_047362544
LinkDB
All DBs
Position
14:complement(2598414..2605485)
Genome browser
AA seq
1119 aa
AA seq
DB search
MSVDAYGPSSQTLTFLDTEEADLIGADTQGSEFDFTDFTLPSPSQTQASQHDAAQSQPSQ
PIQVNGTSGSSSLDLKISGAAQSLAELQFEEEEEEAYYNRDLPEHACKYCGIHEASCVVM
CNVCRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYSCAVRNVFVLGF
IPAKADSVVVLLCRQPCAAQSSLKDMNWDQEQWKPLIEDRSFLAWLVKIPSEQEQLRARQ
ISAQQINKLEELWRDNVDATFQDLEKPGVDEEPQQVLLRYEDGYQYQNIFGPLVKLEADY
DKRLKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGELHKPWSG
IGHVIKIPDNYGEEVGIELKNNAGAPTECISNFVVDFIWKSTSFDRMQLALRKFAVDDTS
VSAYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGT
GKTVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKVHKSNLKVVRLCAKSREAIDSPV
SFLALHNQIKNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCT
CVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA
RAGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKID
FPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKPEQIGVITPY
EGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDP
RRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKP
KKLVNAANPGSHFMTTSMYDAREVLIPGSVYDRSGNQVNGTQNHNPYYQRNVPLDIFSRT
HDTISYISPERAQAAMNNVPVPVGMFMNMAHVPPRFYNQHQQALQARQNQRNRRGTPASK
NKSGARMGKLSQTEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPGLSQAELSQDSFAVG
EFQSQMDGLLSQDSTYQGDRSGFYQSGQSQAGGQFSQPY
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcgatgcttatgggccaagtagccaaaccctaacgttccttgataccgaggaa
gctgatttaattggtgccgatactcaaggaagtgaatttgatttcacagactttacatta
ccatcaccaagccagacacaggcttcgcaacacgatgcggctcaaagtcaaccgagtcag
cctatacaggttaatggaacgagcggtagttcgtcattggacttaaaaatttctggtgct
gctcagagcctagccgaattacaatttgaagaggaagaagaagaggcatattataatcgt
gatttaccagaacatgcttgcaaatattgcggtattcatgaagcttcttgcgtcgttatg
tgcaatgtatgtcgtaaatggttctgcaatggacgaggcaatacatctggttctcatatt
atcaatcaccttgttcgagcaaagcacaaagaagttacattgcacagagatggaccattg
ggtgaaactgtattagaatgttattcttgtgcggttagaaatgtatttgttcttggtttt
ataccggctaaagcagattctgttgtcgtattattgtgccgacaaccttgtgcagcccag
agctctctaaaagacatgaattgggatcaagaacaatggaaaccattgatagaagatcgt
agtttcttagcatggcttgtaaaaataccatctgaacaggaacagctaagagccagacaa
atatctgctcaacagattaacaaattggaagaattgtggcgagacaatgttgatgcaact
tttcaagatcttgaaaagcctggtgtagatgaagaaccgcaacaggtcttattacgttat
gaggatggataccaatatcagaatatatttggcccgcttgtaaaattagaagctgattat
gacaaacgtttaaaagaatcacagacccaagaaaatattgaagtaagatgggacgtaggt
ctgaataaaaaaacaatagcatattttatgttagctaaaactgatggtgatatgaaatta
atgcatggagatgaattaagacttcgttatttgggagaacttcacaaaccatggtctggt
attggtcatgttatcaaaattcctgacaattatggagaagaagttggtatagaattgaaa
aataacgcaggcgctcctacagagtgcattagtaattttgtcgttgatttcatctggaaa
agcacaagctttgatcgaatgcaattggcactacgaaaatttgccgtggatgatacatcc
gtatcagcgtatatatatcatagattgctcggtcacgaagtagaagaagttctatttcgt
tgtcatttaccgaaacattttagtgctcctaacttgccagatttaaatagatcccaagta
tacgctgtaaaacatgctgtacaacgaccattgtctttgatacaaggtccgcctggtaca
ggaaaaactgtaaccagcgctacaatagtatatcagcttgtgaaacaaaacggaggtccg
gtacttgtttgtgcaccatctaataccgcggtcgatcaacttacggagaaagtacataaa
tctaatttaaaggtagtacgtctttgtgcaaaatcacgtgaggcgattgattcgcccgta
agttttcttgcattgcacaatcaaataaaaaatatggagacaaatacggaattgcaaaag
cttcaacaattgaaagacgaaacgggagaattatcaagcgtagatgaaaaacgttataga
cttttaaagaaagctgcagaaaaagaattgttagaggcggccgatgtgatatgttgcacc
tgcgttggcgcaggtgatccaagattgcacagattaaaatttcactctatacttatagac
gaaagtatgcaagcaacggaaccagaatgtatggtaccagttgttcttggagctaaacaa
ttaatacttgtcggagatcattgccaattaggacctgtggttatgtgtaagaaagctgca
agggctggactttcccaatcattatttgaaagattggtcgttcttggcatcagaccattt
cgtcttgaggtccaatatcgtatgcacccagatctgtctcgttttccatctaatttcttt
tacgaaggttcccttcaaaatggagtgtgcgccgacgaaagaaaattattaaagattgat
tttccttggcctgctcctgacaaacctatgttcttctacgtaactcaaggtcaagaagaa
attgctggtagcggtacatcttatttgaaccgaacggaagcatctaacgtagaaaaaata
acgacaagatttttacgttgcggcgtaaaaccagaacaaattggtgtaataacaccttac
gaaggtcaaagggcatacttggttcagtacatgcaatatcaaggttcgctgcattctaaa
ttatatcaagaaatagaagtcgcaagtgtcgatgcttttcaaggacgcgaaaaggatata
ataattatgtcttgcgtaagatcgaatgaacatcagggtataggatttttaaacgatcca
agaagattaaacgttgcattgactcgtgcaaaatatggtattattatcgtaggaaatcca
aaagtactttcgaaacaaccactttggaatcatttgctgagcttttacaaggaacaaaag
gtccttgtagagggcccattgaataatttgaaagaatctatgatacaatttgctaaacca
aaaaagcttgttaatgccgcaaatccaggatcacactttatgacgacatctatgtacgat
gccagagaggttttgattcctggttctgtttacgatcgttccggtaatcaggttaacgga
actcaaaatcacaatccgtattatcagagaaacgtacctttggatattttcagtagaact
cacgataccataagttacataagccctgaaagagcacaggccgccatgaataatgtacca
gtcccagttggtatgtttatgaacatggcccatgtaccaccgcgtttttataatcaacat
caacaggctctacaagcaagacaaaatcaacgaaatagacgtggcactcccgcatctaaa
aataaatctggtgcgcgtatgggtaagctaagtcaaaccgaacaaaacacacaaccatac
agccaaccaggattaccattgactcaagggacaactcagggtatgtctcagccaggattc
agtctttctcagcctggattaagccaggctgaactttcacaggattccttcgcggttggg
gaatttcaatcacaaatggacggcctgctgtcccaagattcgacttatcaaggtgataga
agtggtttttatcaatctggtcagtcacaagccgggggacaattctcccagccatactga
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integrated database retrieval system
