Vespa velutina (Asian hornet): 124954788
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Entry
124954788 CDS
T09814
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
vve
Vespa velutina (Asian hornet)
Pathway
vve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124954788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vve03041
]
124954788
Enzymes [BR:
vve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124954788
Spliceosome [BR:
vve03041
]
Complex C
Other components
Step II factors
124954788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
HA2_C
DEAD
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
AAA_16
T2SSE
AAA_30
ABC_tran
PhoH
ATPase_2
AAA_24
AAA_7
Sigma54_activ_2
Sigma54_activat
cobW
ATPase
AAA_23
Motif
Other DBs
NCBI-GeneID:
124954788
NCBI-ProteinID:
XP_047364195
LinkDB
All DBs
Position
16:complement(3259675..3264278)
Genome browser
AA seq
1132 aa
AA seq
DB search
MSEDSNLYRLEGSDNKPGGLIIRKKASDHTFKKPQSSVLGLDKLAERKRRENSQEPTESK
SRLDTKERKYRSYEEETPTHTGGVNSEAQKRLETRLKHQRLNAQEKHSRYHDRDRDKRKD
RDRDRDRERSRSRDSIRQTPLRFKDEPQTPKFRTKDPTSKSNWDDDEDEEPRKSSWDHPT
PNLYASKDGRESVRSEFTPSYKYNSWNKDYRASGTTPMIDGEEKELWEEEQQRLDREWYA
LDDGENYAFADVSEEYTQKKEMELEAKRQKRVSAQQRQINKDNELWERNRMLTSGVVSSL
DHDDDPDDEAEGRVHLLVHNVVPPFLDGRIVFTKQPEPVVPVRDPTSDMALVARKGSALV
RAYREQKERRRAQKKHWELAGTHIGNIMGVRDRRKEDKELPGQEMDFKAGQKYARHIGAG
EITGEAKHRSIQHQRRSLPVFAVRQELLNVIRENSVVVIVGETGSGKTTQLTQYLHEDGY
SCYGIIGCTCPRRVAAMSVAKRVSDEMATALGEKVGYAIRFEDCTSKDTVIKYMTDGILL
RESLREGDLDRYSVIIMDEAHERSLSTDVLFGLLREVVARRHDLKLIVTSATMDSSKFSA
FFGNAATFQIPGRTFPVEILHAKNPVEDYVDAAVKQVLQIHLQPRSGDILVFMPGQEDIE
VTCEALKERLAEIESAPPLSILPIYSQLPSDLQAKIFQRSEGGLRKCVVATNIAETSLTV
DGIVFVVDSGYCKLKVYNPRIGMDALQVYPVSRANADQRAGRAGRTGPGYCYRLYTRRQY
LDELLATGVPEIQRTNLANTVLLLKSLGVQDLLAFHFMDPPPQDNILNSLYQLWILGALD
HTGRLTPLGRQMAEFPLDPPQCQMLIVASQLGCTADILIIVSMLSVPSIFYRPKGREEDS
DSAREKFQIPESDHLTYLNVYNQWKANGYSTSWCNDHFIHAKAIRKVREVRQQLEEILKQ
QKMEVVSCGTDWDIVRKCICSAYFHQAARLKGIGEYVNCRTGMPCHLHPTSALFGMGFTP
DYVVYHELVMTAKEYMQCVTAVDGHWLAELGPMFFSVKETGRSGRAKRRQAMQHLHEMEG
QMKEAEEEMKARAQEQLEREQASVKRKEILTPGIREPGTPAPYRKTPGRLGL
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagattcaaacttatataggttagaaggatctgacaataaacctggtggctta
attattcgtaagaaagcttccgatcacacatttaaaaagcctcaatcatctgttttgggt
ttggacaaactcgcagaaagaaaacggcgagaaaattcgcaggaacctacagaatcaaaa
tctagattagatacaaaagaaagaaaatatagatcttatgaagaagaaacacctactcat
acaggtggagtaaattctgaggcacaaaagagattggaaacgagactcaaacatcaaaga
ttaaatgcacaagaaaagcattcaaggtatcatgatcgtgatagagataagagaaaggac
agggatagagacagagatagagaacgtagtcgaagtagagatagtataagacaaactcct
cttagatttaaagatgaacctcaaacacccaaatttaggaccaaagatcctacatccaaa
agtaattgggatgacgacgaggatgaagaaccaaggaaatcaagttgggatcatcctacg
cccaatctttatgcttctaaagatggtcgtgaaagcgtcagaagtgaatttacaccttca
tataaatataattcttggaacaaggattatagagcttctggtactacaccaatgatagat
ggagaagaaaaagaattatgggaggaagaacagcaaagacttgatagagaatggtacgca
ttggatgatggagaaaattatgcttttgctgatgtatcagaagaatatactcaaaaaaag
gaaatggaattagaagcaaaaagacagaaacgagtttcagctcagcagaggcaaataaac
aaagataatgaattatgggaaagaaatagaatgttaacttcaggtgttgtaagttcttta
gatcatgatgatgatccagatgatgaagcagaaggaagagttcatcttctagttcataat
gtagtacctccatttttagatggacgaatcgtattcactaagcagccagagcctgttgta
cctgtgcgcgatcctacttccgatatggcacttgtagcaagaaaaggctctgcattagta
cgagcataccgtgaacaaaaagaacgtcgtagagcgcagaaaaaacattgggagttggct
ggaacacatataggtaacattatgggagtacgtgacagaagaaaagaggataaagaactt
cctggtcaggaaatggattttaaagctggtcagaaatatgcaagacatataggtgctggt
gaaattactggagaagcaaaacaccgatctatacaacatcaaagaagaagtcttcctgta
ttcgctgtaagacaggaactcttgaatgttatcagagaaaatagtgtagttgtaatagta
ggagaaactggaagtggtaaaactactcaattaacacaataccttcatgaggatggctat
agttgctatggaataattggttgtacgtgtcccagaagagtagctgccatgtcagttgcc
aaaagggtgtctgatgaaatggctacagcattaggagaaaaagttggttacgcaattcgt
ttcgaggattgtacatccaaagatactgttataaaatatatgacagatggtattttgtta
agagaaagtttgcgagaaggtgatttagatcgatatagtgtaataattatggatgaagct
catgaacgatctctttctactgatgttttgtttggtttacttagagaggttgttgcaagg
agacacgatttgaaactaattgtaacttcagctacaatggattcaagtaaattttctgcg
ttttttggaaatgcagcaacatttcagattcctggtcgaacatttcctgttgagatttta
catgcaaaaaatccagttgaagattatgtagacgctgctgtgaaacaagttttgcaaatc
catttacaaccaagaagtggagatattttggtattcatgcctggtcaagaagatatcgaa
gtcacatgtgaagcattgaaagaaagattggctgaaatagaatcagctcctccactttca
attttaccaatatattctcaattaccgtcggatttacaagctaaaatttttcaacgttcg
gaaggtggattacgtaaatgcgttgttgcaaccaatatagcagaaacatctttgacggta
gatggaattgtatttgtcgttgactcagggtattgtaaactgaaagtatataatccacga
attggtatggatgctcttcaagtatatcctgtttcaagagctaatgctgatcagcgtgct
ggaagagctggtcgtactggacctggttactgttacagattgtacacacgtagacaatat
ttagatgaactactggcaacaggagtgccagaaattcagcgtacaaatttagccaatact
gtattacttctgaaatcattgggagttcaagatttacttgctttccattttatggatcct
ccgccacaagacaatatacttaattctttgtatcagttatggatattgggtgctcttgat
catacaggacggttaacacctttaggacgtcaaatggcagaatttcccttggatcctcca
caatgtcaaatgctaatagttgcttctcagcttggttgtaccgcagatattttaattata
gtttctatgttatcagtgccttcaatattttatcgcccgaaaggtcgagaggaagattct
gattcagcaagagaaaaatttcaaattccagaatcagatcacttgacatacctcaatgta
tataatcagtggaaagctaatggatattctacttcatggtgtaatgatcattttatacat
gcaaaagctatacgtaaagtcagagaagtgcgtcaacaactggaagaaattttaaaacag
caaaaaatggaagttgttagttgcggtactgattgggacatagtacgtaaatgcatatgt
tctgcgtatttccatcaggcagctcgattaaagggtatcggtgaatatgttaattgtcgt
actggaatgccctgtcatcttcatcctacttcagctttatttggtatgggttttacacct
gactatgtcgtttatcatgaactagttatgacggcaaaagaatacatgcaatgtgtaacc
gcggtcgatggacactggttagctgaattaggtccgatgttctttagtgtgaaagaaaca
ggacgaagtggtcgagcaaaacgacgacaagcaatgcaacatctgcatgaaatggaggga
caaatgaaagaagcagaagaggaaatgaaagcaagagcgcaagaacaattagaacgtgaa
caagcttctgttaaaaggaaagagattcttacaccaggtatcagagaaccaggtacgcca
gcaccatatcgtaaaactccaggacgtttaggattgtaa
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