Vespa velutina (Asian hornet): 124954968
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Entry
124954968 CDS
T09814
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 homolog isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
vve
Vespa velutina (Asian hornet)
Brite
KEGG Orthology (KO) [BR:
vve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vve04121
]
124954968
Ubiquitin system [BR:
vve04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
124954968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
124954968
NCBI-ProteinID:
XP_047364635
LinkDB
All DBs
Position
16:3120773..3163230
Genome browser
AA seq
1806 aa
AA seq
DB search
MANGSSTGNNPTSQSNGNPNGGGGSGGGGVGGGAGGSGGTTSSAGNPNVQPAVDQPAQGG
QILDWEDVDRFSFEDSDHFEEDSLCSWSSEPESLCNNWRGWRRPTAGFGTAKRPTDDDSQ
VPTLCELSARCVASHIPFELVEHVYPPVPEQLQLRIAFWSFPDNEEDIRLYSCLANGSAD
EFQRGEQLFRSRSVKNPLQIGFHLSASVNPQMMSATSGVARSQFNVAVTFDRRKITSCNC
TCSSKAYWCAHVVAVCLHRIHMPTQVCLRAPVSESLSRLHRDQLQKFAQYLISELPQQIL
PTAQLLLDELLSAQPNAINSYCGAPDPTAGASAHDQTSWYLDEKTLHDNIKKILIKFCVP
APIVFSDVNYLSTTAPPAAAEWSSLLRPLRGREPEGMWNLLSIVREMFKRTDRNAIPLLE
IITEECMACEQIIVWWFNTKVALLNGTGHGGGKHGNMNSNVHASQHACSSLCDEIVVLWR
LAALNPGLSPAEREMLHDQFMAWHMKIIDKVTKSRGTSVSHNSHNKNNSSSYKDSLKNDL
TVFVGFKTALEACYLDWEEYTLPGITYTAESNPMYHCPFTCFRHVGDSGTEVNQVNSSSA
VLNCQPPISHHHSRRPVPLGLVEFSYTDRRRLNPREFPGLCSRGSGGDGNRSSVSSEGFC
ENDTDMADISEPQLLLRRGCARLNNCGDTDSQEGGGSESSSNSNVSLKNVQDSNKHCSNV
LSSESHSDSSESSNNKTTNEVKCGRANFVDYRDKSRTVNPKATGSKTEQESEQENDASRR
QSKDESSSSSSDSPSGDEYNVYYYDSKATVNNTGNDSKTESPLTIAPSASALLGNLKKTE
DPWGIFLARAEGLYAHGHTREACILGVRLAEELLANPPDLMIEEPPVPLKGKKKKQQVNP
ASHQLTCLASATLAKCCFLCTVLAENPEYHNLAFRVGLYGLEMARPPANTKPLEVKLAHQ
ESELVGLLKKIPLGQAELNMVRQRAAQLRDGVLRSRGHALLPIILASFIFDTLNTPRGPE
INKEADEALGFDAAVAALGLKANVSEADHPLLCEGTRRQRGDLAITLLVHYKDAPAKVAR
IMNKLLDRDVHQLIKSPILSSYYTANPITKPETTTHLPDDECLSPLTGTDVPGNSDNVIG
NGSRPHSSTSAELENSMSALTLQPPLVQPVPTRTKETRYKSKRVCPSIPNQPSEAGAHFM
CELAKTVLAKAGGSSSTSLFTQVSTNQNHHVPHRALHMCAFQLGLYALGLHNCVSHNWLS
RTYSTHVSWITGQAVEIGAPAIWFLIESWEGHLTPPEAVSIADKSSRGSDPNMVRAAAEL
ALSCLPHAHALNPNEVQRAILQCKEQSDVMLEKACITVENTAKGGGVYPEVLFQVAKYWY
ELYIRHTPGGEQQDEMPHDSLQLDLNSALLVEPGPPVDLSAGQMIPGPTQAVVVTSTQPP
PQPYPAHPTITTLAPLGTVQQYYNHEAQIIQQPGVGMPYAVAPYSFVHPHHSIPTFGGPM
PSHRVTLPPAPPHMQMYHTAFPPHPRCPQHPQHPQHPHHPPPAAQPPPVPQYYAPQPPPP
PGTHHLFTMQQTMPVNVQAGVTHGPIPGQSGLPGPALVQAQPIISTVRPQPQVHRQNQPF
RQQQFRALVAAYRVGMLALETLARRVHDDRPQAKYARNPPYGEDVKWLLRVSKRLGSQYL
HQLCVCTVNSIVSPFVLHEVALEAAHYLARNNPTLVLQHLRSAPLAPLVHKCQQMYIQCM
HQKLYHLAPGDYEDFASVVCAARAAFHITPEGHTQFKEWLQSIKRSQSCNKDLWAQINAA
LQQNGK
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatggatcatcaaccggaaataatcctacatcccaatcaaacggaaatcctaat
ggcggcggtggtagtggtggtggtggtgttggtggtggtgctggtggtagtggtggcacc
acctcgtccgcgggaaatcccaatgtacaacctgcggtcgatcaacccgcccaaggtgga
caaattttggattgggaagacgtcgatcgtttctcgttcgaggattccgatcattttgaa
gaggattcgctttgtagttggagcagcgaacccgaatcactttgtaacaattggcgagga
tggcgtcgaccaactgcaggatttggtaccgcaaaaaggccgacggatgatgattcacaa
gtgccgacattatgcgaactatcggcacgatgcgttgcatctcacatacccttcgagttg
gtcgaacacgtttatccacctgtgccggaacaattgcagctgaggatagctttctggagt
tttcccgataacgaggaagacataagactctattcttgccttgcaaatggcagtgcggat
gaatttcaacgtggcgaacaactatttcgttcgagaagcgtcaagaatcctctgcaaata
ggttttcatctcagcgccagcgtgaatccgcaaatgatgtcagcaacgtctggtgtcgct
agatctcaattcaatgtagcagtaactttcgatcgtcgaaagatcacatcgtgcaattgt
acttgctcctcaaaggcttattggtgtgcacacgtagttgctgtttgtcttcatagaata
catatgccgacacaagtttgcctaagagcaccagtgagcgaatctctgtcgcgattgcac
agagatcaattgcaaaaatttgctcaatatcttataagcgaattgccacaacaaattctt
cccactgctcaattactcttggacgaattgttgtcagcccaaccgaatgccatcaatagt
tattgtggtgctcctgatcctacggcaggtgcttccgcgcacgatcaaacatcttggtat
ctggacgagaaaacgttgcacgataacattaagaaaattcttatcaagttctgtgtacca
gcgcctattgtgttcagcgacgtaaactatttgagcactacagcacctccggctgctgcc
gaatggtcgtcgcttcttagaccattgagaggtcgagaaccagagggaatgtggaacctg
ctctcgatcgtacgtgaaatgttcaagagaacggatcgtaacgcaataccgcttttagag
attatcacagaagaatgcatggcctgtgaacaaataatagtttggtggtttaacacgaaa
gtagctttattgaatggtacaggacatggtggtggtaaacatggtaatatgaacagcaac
gttcatgcatctcaacatgcgtgttcttcgttgtgcgacgaaattgtcgtactttggaga
ttggctgctctaaatcctggattatcaccggccgaacgagagatgctacatgatcaattt
atggcatggcatatgaagatcattgataaggtcactaaaagtcgtggtacctcggtatcc
cataattcgcataataaaaataatagcagtagctataaggattcattgaagaacgattta
accgtatttgttggcttcaaaacggctcttgaggcatgttatttagattgggaagaatat
actcttccgggtatcacatacaccgctgaaagcaatcccatgtatcattgtccatttaca
tgttttcgacatgttggtgatagtggtaccgaagtaaatcaggtgaattcgagttcggct
gtcttgaattgccaaccacctatttctcatcatcacagcagacgacctgtaccattaggt
ctcgtagaatttagttatacggatagacgaagattgaatccacgagaatttccgggattg
tgttcaagaggtagcggcggtgatggaaatcgtagcagtgttagttctgaaggtttttgc
gaaaatgataccgatatggccgacatttcggaaccacaattattacttagacgtggatgc
gccaggttaaataattgcggagatacagattcacaggagggcggaggtagcgaatcctca
tcgaacagtaacgtgagtttaaaaaatgttcaagactcgaataaacattgttcgaacgta
ttatcatcggaaagtcatagtgacagtagtgaaagtagtaacaataagactactaacgaa
gtgaagtgcggcagggcgaatttcgtcgactatcgtgataagtcgcgtacggtaaatcct
aaagcaacaggatcaaagactgaacaagaatctgaacaagagaatgatgcatccagaaga
caatcaaaggatgaaagttcatcttctagcagcgatagcccttctggtgatgaatataac
gtttattattatgattcaaaggcaacagtgaataatacaggaaacgattcgaaaaccgaa
tcacctttgaccatagcaccgagcgcaagtgcattgttgggtaatctaaagaaaacagaa
gatccttggggtatatttcttgctagagcagagggtctttatgcccatggacatacgcga
gaagcttgtatacttggtgttcgattagcagaagaattattagctaatcctccggattta
atgatcgaggaaccacccgtgccattgaaaggaaaaaagaaaaagcaacaagtgaatcca
gcgtcacatcaattaacgtgccttgcctccgccactttggcaaaatgttgcttcttgtgc
acggtactcgctgaaaatcctgaatatcacaatcttgcattcagagtaggtctctatggt
ttagaaatggctagaccgccggcaaatacgaaacctttagaggtcaaactagcacatcaa
gaaagcgaactcgtcggtttgttgaaaaaaattcccctaggtcaagctgaacttaatatg
gtcagacaaagagcggcgcaattacgagatggtgtattacgatcaagagggcatgcattg
ctaccaattattttagcaagcttcatattcgatactttgaatacaccgagaggtccggaa
attaacaaagaagctgatgaagctctgggtttcgacgcagctgtcgctgctttaggattg
aaagcaaacgtaagtgaagcggatcatccgcttctttgcgaaggtactagacggcaaagg
ggcgacttggcgattactcttcttgtacattacaaggatgcaccggctaaagtagctaga
ataatgaacaaacttttggatcgtgatgttcatcaattaattaagtctcctattcttagt
agttactacactgcaaatcctatcactaaacctgagacgacaacgcatttgccggatgac
gaatgtttgtcgcctttaacaggcaccgatgttcctggaaacagtgacaatgttatcggt
aatgggagtagaccacacagtagtacaagcgcggaattagaaaatagcatgagtgcatta
actcttcaaccaccattagtgcaaccagtaccaactagaactaaagaaacaaggtacaag
agtaagcgagtatgtccatcgatccctaatcaaccatccgaagctggtgcacatttcatg
tgtgaattggctaaaaccgtattggctaaagcaggtggtagtagttcaacttcattgttc
actcaagtatcaacaaatcaaaatcatcatgtaccacatagagctttacacatgtgcgcc
tttcaattgggcttatatgctcttggtcttcataattgcgtcagtcataattggttgagt
cgtacttattcaacacacgtatcttggatcactggacaagctgtagaaattggtgccccg
gctatatggtttctcattgaaagttgggaaggtcatctaactcctccagaagcagtcagt
attgctgataaatcttccagaggtagcgatccaaatatggtcagagcagccgcagaattg
gcactatcttgtttaccacatgctcatgctcttaatccaaatgaagtgcaaagagcaatt
ttacagtgtaaggaacaaagtgatgtgatgttggaaaaagcatgtatcacggttgaaaat
acggcaaaaggtggcggtgtttatccagaagtactttttcaagttgccaaatattggtac
gagttgtatatccgtcacacaccaggaggagaacaacaagatgagatgccacacgattct
ttacagttagatcttaacagtgcccttttagtagaacctggtcctccggtagatttatct
gcaggtcaaatgataccaggtccaacacaggccgttgttgtaactagtacacaaccacct
cctcagccatatcctgcacatcccactataacgactctggcacccttgggtacagtacaa
cagtattacaatcacgaagcacaaataatacaacaaccaggagttggcatgccgtatgcg
gtagctccctacagtttcgtacatcctcatcattcgattccaacgttcggtggcccgatg
ccttcgcatagagtaactctaccacctgcaccaccacacatgcaaatgtatcacacagcc
tttccacctcatcctagatgtccacagcatcctcaacatccacaacatccgcatcatcca
ccgccagctgcacagccaccgccagtgccgcaatactacgcaccgcaacctccgcctccg
ccaggaacccatcatttgttcaccatgcaacaaaccatgccagttaacgttcaagcggga
gtaacacacggtcctattcctggacaaagtggtctgcctggaccagcattggtacaggct
caaccaattatatcgactgtaagacctcaaccccaggttcatagacaaaatcaaccgttt
aggcaacaacaatttagggcattggttgcggcgtatcgcgtaggtatgttagccttggag
acattagctcgtagagttcacgacgacaggccccaggcaaaatatgcacgtaatccacca
tacggagaagacgttaaatggttgttaagagtttcgaaacgtttgggctcccaatacctt
catcagttgtgtgtctgcacggttaacagtatcgtcagcccgtttgttcttcatgaagtg
gcactcgaagcggcccattatcttgccagaaataatccaactttggtgttacaacatttg
agatcggctcctttggcaccgctagtacacaagtgtcaacaaatgtatattcagtgtatg
catcagaagttatatcatctggcacctggcgattacgaggacttcgcaagtgtagtttgt
gcggcaagagccgcattccatatcactcctgaagggcacacacaattcaaagaatggctt
caatctattaagagatctcaatcgtgtaacaaagatctatgggcgcaaatcaatgcggca
ttacagcaaaatggcaaatga
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integrated database retrieval system
